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WormBase Tree Display for Gene: WBGene00002020

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Name Class

WBGene00002020SMapS_parentSequenceT27E4
IdentityVersion1
NameCGC_namehsp-16.49Person_evidenceWBPerson36
Sequence_nameT27E4.9
Molecular_nameT27E4.9
T27E4.9.1
CE14251
Other_namehsp-16
CELE_T27E4.9Accession_evidenceNDBBX284605
Public_namehsp-16.49
DB_infoDatabaseAceViewgene5J570
WormFluxgeneWBGene00002020
NDBlocus_tagCELE_T27E4.9
NCBIgene179288
RefSeqproteinNM_072955.3
SwissProtUniProtAccP02513
UniProt_GCRPUniProtAccP02513
OMIMgene123580
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhsp
AlleleWBVar01499903
WBVar01500129
WBVar01499419
WBVar01499420
WBVar01499056
WBVar01499249
WBVar00250229
WBVar01499316
In_clusterHSP16A
RNASeq_FPKM (74)
GO_annotation00105708
00105759
00106140
OrthologWBGene00052625Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00038448Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00140961Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00149500Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00154236Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00151214Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00155603Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00126654Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00124823Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00073755Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00073752Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068608Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068605Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00027234Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027246Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226306Brugia malayiFrom_analysisWormBase-Compara
WBGene00226851Brugia malayiFrom_analysisWormBase-Compara
WBGene00236790Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g12732Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12776Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12783Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12785Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2043Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15082Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5545Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5547Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g4574Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g5092Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17962Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18638Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g5549Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g10286Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14653Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14657Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14875Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g16154Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g6663Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g22417Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23489Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8365Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8373Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17873Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g21397Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g23637Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_V.g20090Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g20092Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g20529Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g20543Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold575.g4426Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g16839Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19838Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00279.g8578Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01089.g18311Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_06367.g36441Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_24822Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_018404Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_10087200Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50235600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50235800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50329000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50329200Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50329800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50330100Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50355400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50359400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g15163Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00236859Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257141Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257259Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258086Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261172Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265225Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265337Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288111Trichuris murisFrom_analysisWormBase-Compara
WBGene00289300Trichuris murisFrom_analysisWormBase-Compara
WBGene00294628Trichuris murisFrom_analysisWormBase-Compara
WBGene00294630Trichuris murisFrom_analysisWormBase-Compara
WBGene00296278Trichuris murisFrom_analysisWormBase-Compara
WBGene00296279Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0011296Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
FB:FBgn0001229Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
FB:FBgn0001227Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
FB:FBgn0001224Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
Panther
FB:FBgn0001223Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
Panther
ZFIN:ZDB-GENE-020508-1Danio rerioFrom_analysisEnsEMBL-Compara
OMA
Panther
HGNC:2388Homo sapiensFrom_analysisEnsEMBL-Compara
OMA
Panther
HGNC:CRYAA2Homo sapiensFrom_analysisEnsEMBL-Compara
OMA
Panther
RGD:2413Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
Paralog (17)
Structured_descriptionConcise_descriptionhsp-16.49 encodes a 16-kD heat shock protein (HSP) that is a member of the hsp16/hsp20/alphaB-crystallin (HSP16) family of heat shock proteins, and that is identical to the protein encoded by hsp-16.48; HSP-16.49 is likely to function as a passive ligand temporarily preventing unfolded proteins from aggregating.Paper_evidenceWBPaper00004424
WBPaper00013029
WBPaper00013239
WBPaper00013280
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable unfolded protein binding activity. Involved in endoplasmic reticulum unfolded protein response. Human ortholog(s) of this gene implicated in cataract 9 multiple types. Is an ortholog of human CRYAA (crystallin alpha A).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0110266Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2388)
Molecular_infoCorresponding_CDST27E4.9
Corresponding_transcriptT27E4.9.1
Other_sequenceCR11733
Dviv_isotig13013
FM207717.1
Dviv_isotig16414
DN191217.1
AE01385
AM743383.1
OOC00361_1
EX536181.1
AI151705.1
EX540504.1
CSC02236_1
Dviv_isotig00086
HBC02326_1
NBC00022_2
Dviv_isotig00093
CRC01136_1
CR02466
Dviv_isotig12704
Acan_isotig12066
AE01402
AJ310811.2
BF064351.1
Dviv_isotig08762
Dviv_isotig13012
NB07476
Dviv_isotig00092
CR02273
Dviv_contig19752
HCC13054_1
Dviv_isotig00095
HC05634
Name_isotig02179
Hbac_isotig00119
AE01377
AI077031.1
EX549149.1
AI511597.1
AYC00012_2
Dviv_isotig08761
AI066925.1
NBC00022_1
CB037312.1
CB039104.1
Dviv_isotig12703
AYC00359_1
CB038670.1
DN190972.1
AYC00359_2
CBC03560_1
TDC01610_1
AYC01614_1
ES744459.1
Oden_isotig12485
Tcol_isotig05430
FD515506.1
HCC07453_1
EX550621.1
Dviv_isotig00096
OVC04013_1
AE01291
EX567090.1
GO239209.1
Dviv_isotig00088
Tcol_isotig05429
NB07995
Tcir_isotig13245
Hbac_isotig00120
DN191211.1
DVC02732_1
HC09591
CJC04799_1
Dviv_isotig00090
CRC02578_1
GO239208.1
Oden_isotig12486
FG588787.1
EV852334.1
Dviv_isotig08763
AYC04595_1
HM017960.1
CJC01488_1
AE00061
DN190605.1
Dviv_isotig08760
CRC10398_1
CB037167.1
Dviv_isotig00089
TDC00504_2
AYC00012_3
Dviv_isotig16415
AE00081
DN190154.1
HC01928
CB036293.1
AE01113
Dviv_isotig00091
AE00033
Oden_isotig12487
AAC00096_1
AE01085
JK315785.1
Dviv_isotig00094
AI249216.1
CB036416.1
Dviv_isotig12705
Dviv_isotig00097
Dviv_isotig00087
ACC21317_1
Associated_featureWBsf234179
Experimental_infoRNAi_resultWBRNAi00093732Inferred_automaticallyRNAi_primary
WBRNAi00063167Inferred_automaticallyRNAi_primary
WBRNAi00106385Inferred_automaticallyRNAi_primary
WBRNAi00106384Inferred_automaticallyRNAi_primary
Expr_patternExpr1157863
Expr2012621
Expr2030857
Drives_constructWBCnstr00010087
WBCnstr00036516
Construct_productWBCnstr00036516
AntibodyWBAntibody00001859
Microarray_resultsSMD_T27E4.9
Aff_T27E4.3
Expression_cluster (159)
Interaction (28)
Map_infoMapVPosition1.9262Error0.001695
PositivePositive_cloneT27E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4419
Pseudo_map_position
Reference (61)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene