Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00027246

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00027246SMapS_parentSequencecb25.fpc0090
IdentityVersion1
NameSequence_nameCBG04607
Molecular_nameCBG04607
CBG04607.1
CBP06931
Other_nameCBG_04607Accession_evidenceNDBHE601135
Public_nameCBG04607
DB_infoDatabaseNDBlocus_tagCBG_04607
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.749097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
101.74From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
35.5549From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.17567From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
27.626From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.83922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.00744From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000310.3225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
11.7269From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
13.1314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
11.5758From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
11.6766From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000043.60207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
4.15899From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.71591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.85822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.95585From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.44053From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.16251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.4058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
17.6043From_analysisRNASeq.briggsae.WBls:0000027.control_mean
43.8768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.53025From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
25.7035From_analysisRNASeq.briggsae.WBls:0000027.control_median
37.6878From_analysisRNASeq.briggsae.WBls:0000027.control_mean
97.9383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.441038From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003822.8916From_analysisRNASeq.briggsae.WBls:0000038.control_mean
23.7155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
23.7601From_analysisRNASeq.briggsae.WBls:0000038.control_median
23.8047From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
39.2303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.81585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041125.175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
126.316From_analysisRNASeq.briggsae.WBls:0000041.control_mean
130.396From_analysisRNASeq.briggsae.WBls:0000041.control_median
135.618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
158.366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
86.1036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
146.992From_analysisRNASeq.briggsae.WBls:0000041.control_median
226.071From_analysisRNASeq.briggsae.WBls:0000041.control_mean
369.867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
481.294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.20627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.60775From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.08323From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.39415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
8.3551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.83364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
3.97873From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.64475From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010137.4636From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.3551From_analysisRNASeq.briggsae.total_over_all_stages.control_median
54.2962From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.94268From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (72)
Paralog (19)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Alpha crystallin/Small heat shock protein, animal type; Hsp20/alpha crystallin family; Alpha crystallin/Hsp20 domain; and HSP20-like chaperone. Is an ortholog of C. elegans hsp-16.41 and hsp-16.48. In C. elegans, hsp-16.41 is involved in defense response to Gram-negative bacterium and response to heat.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04607
Corresponding_CDS_historyCBG04607:bp194
Corresponding_transcriptCBG04607.1
Other_sequence (69)
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00027246_A
GPL8303_CB6_WBGene00027246_B
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
WBPaper00058955:heatshock_upregulated_CBG
MethodGene