WormBase Tree Display for Gene: WBGene00013215
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WBGene00013215 | SMap | S_parent | Sequence | Y54G11A | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (60) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (36) | ||||||
Paralog | WBGene00013216 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in intestine; neurons; and somatic gonad precursor based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including rotenone; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Tetratricopeptide repeat protein 38 and Tetratricopeptide-like helical domain superfamily. Is an ortholog of human TTC38 (tetratricopeptide repeat domain 38). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y54G11A.4 | ||||
Corresponding_CDS_history | Y54G11A.4:wp198 | |||||
Corresponding_transcript | Y54G11A.4.1 | |||||
Other_sequence | BMC04875_1 | |||||
Associated_feature | WBsf658399 | |||||
WBsf717045 | ||||||
WBsf990678 | ||||||
WBsf990679 | ||||||
Experimental_info | RNAi_result | WBRNAi00020986 | Inferred_automatically | RNAi_primary | ||
WBRNAi00057429 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1014687 | |||||
Expr1160865 | ||||||
Expr2007928 | ||||||
Expr2026170 | ||||||
Microarray_results (13) | ||||||
Expression_cluster (179) | ||||||
Interaction | WBInteraction000177174 | |||||
WBInteraction000413720 | ||||||
WBInteraction000578357 | ||||||
Map_info | Positive | Positive_clone | Y54G11A | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | II | 22.9011 | ||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
Method | Gene |