WormBase Tree Display for Gene: WBGene00017997
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WBGene00017997 | SMap | S_parent | Sequence | F33D4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mrpl-1 | Paper_evidence | WBPaper00042432 | |||||
Person_evidence | WBPerson261 | ||||||||
Sequence_name | F33D4.5 | ||||||||
Molecular_name (4) | |||||||||
Other_name | CELE_F33D4.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | mrpl-1 | ||||||||
DB_info | Database | AceView | gene | 4I472C | |||||
4I472 | |||||||||
WormQTL | gene | WBGene00017997 | |||||||
WormFlux | gene | WBGene00017997 | |||||||
NDB | locus_tag | CELE_F33D4.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017997|UniProtKB=Q7KPW7 | |||||||
family | PTHR23105 | ||||||||
NCBI | gene | 177549 | |||||||
RefSeq | protein | NM_068856.6 | |||||||
TREEFAM | TREEFAM_ID | TF314989 | |||||||
TrEMBL | UniProtAcc | Q7KPW7 | |||||||
UniProt_GCRP | UniProtAcc | Q7KPW7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 13 Jan 2014 14:35:58 | WBPerson2970 | Name_change | CGC_name | mrpl-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mrpl | ||||||||
Allele (31) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00082463 | ||||||||
00082464 | |||||||||
Contained_in_operon | CEOP4240 | ||||||||
Ortholog (31) | |||||||||
Paralog | WBGene00004412 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00004419 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00009993 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00010896 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00012964 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Predicted to be located in ribosome. Is an ortholog of human MRPL1 (mitochondrial ribosomal protein L1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F33D4.5 | |||||||
Corresponding_CDS_history | F33D4.5:wp105 | ||||||||
F33D4.5:wp115 | |||||||||
Corresponding_transcript | F33D4.5.1 | ||||||||
F33D4.5.2 | |||||||||
Other_sequence (74) | |||||||||
Associated_feature | WBsf651945 | ||||||||
WBsf230311 | |||||||||
Experimental_info | RNAi_result (15) | ||||||||
Expr_pattern | Expr1019954 | ||||||||
Expr1037751 | |||||||||
Expr1150093 | |||||||||
Expr2013704 | |||||||||
Expr2031939 | |||||||||
Drives_construct | WBCnstr00026854 | ||||||||
Construct_product | WBCnstr00026854 | ||||||||
Microarray_results | SMD_F33D4.5 | ||||||||
182887_at | |||||||||
A_12_P106802 | |||||||||
A_12_P109684 | |||||||||
A_12_P149975 | |||||||||
A_12_P149976 | |||||||||
Aff_F33D4.5 | |||||||||
GPL13394_WBGene00017997 | |||||||||
GPL13394_WBGene00017999 | |||||||||
GPL13914_F33D4.5 | |||||||||
GPL13914_F33D4.7 | |||||||||
GPL14144_F33D4.5_246-305_0.890_26_A | |||||||||
GPL14144_F33D4.5_784-843_0.942_3_C | |||||||||
GPL14144_F33D4.5_929-988_0.898_20_B | |||||||||
GPL14144_F33D4.7_166-225_0.954_1_A | |||||||||
GPL14144_F33D4.7_218-277_0.948_2_B | |||||||||
GPL14144_F33D4.7_57-116_0.778_24_C | |||||||||
GPL19516_CGZ0019464 | |||||||||
GPL19516_CGZ0019467 | |||||||||
GPL21109_F33D4.7 | |||||||||
GPL3518_CE29308 | |||||||||
GPL3518_CE29309 | |||||||||
GPL8304_CE_WBGene00017997_A | |||||||||
GPL8304_CE_WBGene00017999_A | |||||||||
GPL8673_F33D4_5P00052 | |||||||||
GPL8673_F33D4_5P00406 | |||||||||
GPL8673_F33D4_5P00791 | |||||||||
GPL8673_F33D4_7P00037 | |||||||||
GPL8673_F33D4_7P00083 | |||||||||
GPL8673_F33D4_7P00253 | |||||||||
GPL9450_F33D4.5 | |||||||||
GPL9450_F33D4.7 | |||||||||
cea2.c.28387 | |||||||||
cea2.c.28392 | |||||||||
Expression_cluster (94) | |||||||||
Interaction (62) | |||||||||
Map_info | Map | IV | Position | 3.40268 | |||||
Positive | Positive_clone | F33D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00042060 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |