WormBase Tree Display for Gene: WBGene00011077
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WBGene00011077 | SMap | S_parent | Sequence | R07B1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R07B1.5 | |||||||
Molecular_name | R07B1.5 | ||||||||
R07B1.5.1 | |||||||||
CE01631 | |||||||||
R07B1.5.2 | |||||||||
R07B1.5.3 | |||||||||
Other_name | CELE_R07B1.5 | Accession_evidence | NDB | BX284606 | |||||
Public_name | R07B1.5 | ||||||||
DB_info | Database | AceView | gene | XK483 | |||||
WormQTL | gene | WBGene00011077 | |||||||
WormFlux | gene | WBGene00011077 | |||||||
NDB | locus_tag | CELE_R07B1.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011077|UniProtKB=Q09419 | |||||||
family | PTHR21629 | ||||||||
NCBI | gene | 187646 | |||||||
RefSeq | protein | NM_001375105.2 | |||||||
SwissProt | UniProtAcc | Q09419 | |||||||
UniProt_GCRP | UniProtAcc | Q09419 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (48) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon (2) | |||||||||
Ortholog (24) | |||||||||
Paralog | WBGene00012571 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
Panther | |||||||||
WBGene00011877 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019306 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012570 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WBGene00016276 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011078 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011079 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00138711 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; RIA; arc ant V; hyp3; and socket cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; RNA-seq; and tiling array studies. Is affected by twelve chemicals including methylmercury hydroxide; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: C6 domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R07B1.5 | |||||||
Corresponding_transcript | R07B1.5.1 | ||||||||
R07B1.5.2 | |||||||||
R07B1.5.3 | |||||||||
Associated_feature | WBsf663207 | ||||||||
WBsf1006556 | |||||||||
WBsf1023635 | |||||||||
WBsf236207 | |||||||||
Experimental_info | RNAi_result | WBRNAi00017504 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051414 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017505 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023580 | ||||||||
Expr1155104 | |||||||||
Expr2005440 | |||||||||
Expr2023661 | |||||||||
Drives_construct | WBCnstr00030949 | ||||||||
Construct_product | WBCnstr00030949 | ||||||||
Microarray_results | SMD_R07B1.5 | ||||||||
SMD_R07B1.6 | |||||||||
186865_at | |||||||||
A_12_P100221 | |||||||||
Aff_R07B1.5 | |||||||||
GPL13394_WBGene00011077 | |||||||||
GPL13914_R07B1.5 | |||||||||
GPL14144_R07B1.5_376-435_0.951_1_A | |||||||||
GPL19516_CGZ0031201 | |||||||||
GPL21109_R07B1.5 | |||||||||
GPL3518_CE01631 | |||||||||
GPL8304_CE_WBGene00011077_A | |||||||||
GPL8304_CE_WBGene00011077_B | |||||||||
GPL8673_R07B1_5P00034 | |||||||||
GPL8673_R07B1_5P00150 | |||||||||
GPL8673_R07B1_5P00266 | |||||||||
GPL9450_R07B1.5 | |||||||||
cea2.i.56362 | |||||||||
Expression_cluster (146) | |||||||||
Interaction (97) | |||||||||
Map_info | Positive | Positive_clone | R07B1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | 1.73026 | |||||||
Method | Gene |