WormBase Tree Display for Gene: WBGene00010713
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| WBGene00010713 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | uso | ||||||
| Allele (167) | |||||||
| Component_of_genotype | WBGenotype00000041 | ||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation (33) | |||||||
| Ortholog (41) | |||||||
| Structured_description | Concise_description | uso-1 encodes the C. elegans ortholog of the Uso1/p115 vesicle tethering protein that in yeast has been shown to function in endoplasmic reticulum-to-Golgi transport; RNAi screens indicate that uso-1 activity is required for normal fat content and distal tip cell migration. | Paper_evidence | WBPaper00005655 | |||
| WBPaper00028783 | |||||||
| Curator_confirmed | WBPerson1843 | ||||||
| Date_last_updated | 04 Nov 2008 00:00:00 | ||||||
| Automated_description | Predicted to be involved in intracellular protein transport; membrane fusion; and vesicle-mediated transport. Predicted to be located in ER to Golgi transport vesicle membrane; Golgi stack; and endoplasmic reticulum. Is an ortholog of human USO1 (USO1 vesicle transport factor). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Modifies_disease | DOID:12377 | ||||||
| Modifies_disease_in_annotation | WBDOannot00000878 | ||||||
| Molecular_info | Corresponding_CDS | K09B11.9a | |||||
| K09B11.9b | |||||||
| Corresponding_CDS_history | K09B11.9:wp141 | ||||||
| Corresponding_transcript | K09B11.9a.1 | ||||||
| K09B11.9b.1 | |||||||
| Other_sequence (26) | |||||||
| Associated_feature | WBsf652344 | ||||||
| WBsf652345 | |||||||
| WBsf667687 | |||||||
| WBsf668492 | |||||||
| WBsf668493 | |||||||
| WBsf998406 | |||||||
| WBsf1018530 | |||||||
| WBsf1018531 | |||||||
| Experimental_info | RNAi_result (15) | ||||||
| Expr_pattern | Expr1017142 | ||||||
| Expr1034688 | |||||||
| Expr1154081 | |||||||
| Expr2017933 | |||||||
| Expr2036069 | |||||||
| Microarray_results | SMD_K09B11.9 | ||||||
| 180517_at | |||||||
| A_12_P114561 | |||||||
| GPL13394_WBGene00010713 | |||||||
| GPL13914_K09B11.9 | |||||||
| GPL14144_K09B11.9a_2418-2477_0.936_2_B | |||||||
| GPL14144_K09B11.9a_2484-2543_0.911_6_C | |||||||
| GPL14144_K09B11.9a_2790-2849_0.966_1_A | |||||||
| GPL19516_CGZ0028758 | |||||||
| GPL19516_CGZ0028759 | |||||||
| GPL21109_K09B11.9a | |||||||
| GPL3518_CE21053 | |||||||
| GPL8304_CE_WBGene00010713_A | |||||||
| GPL8673_K09B11_9aP01326 | |||||||
| GPL8673_K09B11_9aP01740 | |||||||
| GPL8673_K09B11_9aP02397 | |||||||
| GPL8673_K09B11_9bP01128 | |||||||
| GPL8673_K09B11_9bP01542 | |||||||
| GPL8673_K09B11_9bP02199 | |||||||
| GPL9450_K09B11.9 | |||||||
| cea2.3.19717 | |||||||
| cea2.p.95772 | |||||||
| Expression_cluster (88) | |||||||
| Interaction (464) | |||||||
| Map_info | Map | IV | Position | 9.26696 | Error | 0.011495 | |
| Positive | Positive_clone | K09B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference | WBPaper00031234 | ||||||
| WBPaper00037843 | |||||||
| WBPaper00038491 | |||||||
| WBPaper00040780 | |||||||
| WBPaper00055090 | |||||||
| WBPaper00060970 | |||||||
| WBPaper00061547 | |||||||
| WBPaper00065044 | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
