WormBase Tree Display for Gene: WBGene00004978
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WBGene00004978 | SMap | S_parent | Sequence | Y47G6A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | spg-7 | Person_evidence | WBPerson530 | |||
Sequence_name | Y47G6A.10 | ||||||
Molecular_name | Y47G6A.10 | ||||||
Y47G6A.10.1 | |||||||
CE34400 | |||||||
Other_name | phi-23 | Person_evidence | WBPerson2582 | ||||
let-517 | Person_evidence | WBPerson533 | |||||
Y47G6A_247.g | Curator_confirmed | WBPerson1983 | |||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||
CELE_Y47G6A.10 | Accession_evidence | NDB | BX284601 | ||||
Public_name | spg-7 | ||||||
DB_info | Database (13) | ||||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info (11) | |||||||
Disease_info | Potential_model | DOID:0050977 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:315) | ||
DOID:0050952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:315) | ||||
DOID:0050944 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:315) | ||||
DOID:0080840 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:315) | ||||
Molecular_info (5) | |||||||
Experimental_info | RNAi_result (117) | ||||||
Expr_pattern | Expr4061 | ||||||
Expr1015221 | |||||||
Expr1032476 | |||||||
Expr1160254 | |||||||
Expr2016053 | |||||||
Expr2034288 | |||||||
Regulate_expr_cluster | WBPaper00041370:spg-7(RNAi)_upregulated | ||||||
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent | |||||||
Microarray_results | SMD_Y47G6A_247.F | ||||||
SMD_Y47G6A_247.G | |||||||
188388_at | |||||||
A_12_P113701 | |||||||
Aff_Y47G6A_247.G | |||||||
GPL13394_WBGene00004978 | |||||||
GPL13914_Y47G6A.10 | |||||||
GPL14144_Y47G6A.10_1389-1448_0.895_18_C | |||||||
GPL14144_Y47G6A.10_1661-1720_0.919_10_A | |||||||
GPL14144_Y47G6A.10_1752-1811_0.909_14_B | |||||||
GPL19516_CGZ0046986 | |||||||
GPL21109_Y47G6A.10 | |||||||
GPL3518_CE24356 | |||||||
GPL8304_CE_WBGene00004978_A | |||||||
GPL8304_CE_WBGene00004978_B | |||||||
GPL8673_Y47G6A_10P01086 | |||||||
GPL8673_Y47G6A_10P01335 | |||||||
GPL8673_Y47G6A_10P02049 | |||||||
GPL9450_Y47G6A.10 | |||||||
cea2.p.21205 | |||||||
Expression_cluster (117) | |||||||
Interaction (149) | |||||||
WBProcess | WBbiopr:00000077 | ||||||
WBbiopr:00000079 | |||||||
Map_info | Map | I | Position | -3.21963 | Error | 0.03887 | |
Hide_under | WBGene00002709 | ||||||
Positive | Positive_clone | Y47G6A | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Negative | Outside_rearr | hDf24 | |||||
Mapping_data | Multi_point | 5016 | |||||
Pos_neg_data | 8616 | ||||||
8617 | |||||||
8618 | |||||||
8619 | |||||||
Pseudo_map_position | |||||||
Reference (41) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |