WormBase Tree Display for Gene: WBGene00004332
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WBGene00004332 | SMap | S_parent | Sequence | Y18H1A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | rec-1 | Person_evidence | WBPerson533 | |||
WBPerson1795 | |||||||
Sequence_name | Y18H1A.7 | ||||||
Molecular_name | Y18H1A.7a | ||||||
Y18H1A.7a.1 | |||||||
CE33587 | |||||||
Y18H1A.7b | |||||||
CE49243 | |||||||
Y18H1A.7b.1 | |||||||
Other_name | CELE_Y18H1A.7 | Accession_evidence | NDB | BX284601 | |||
Public_name | rec-1 | ||||||
DB_info | Database | NDB | locus_tag | CELE_Y18H1A.7 | |||
NCBI | gene | 171664 | |||||
RefSeq | protein | NM_058372.8 | |||||
NM_001306247.3 | |||||||
TrEMBL | UniProtAcc | V6CLD8 | |||||
Q9BL91 | |||||||
UniProt_GCRP | UniProtAcc | Q9BL91 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00021211 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rec | ||||||
Reference_allele | WBVar00241753 | ||||||
Allele (41) | |||||||
Legacy_information | s180 : general enhancer of meiotic recombination. ES1. | ||||||
Increase recomb. | |||||||
See also s180 | |||||||
[Rose AM ] increases meiotic recombination in gene clusters, reduces recombination on chromosome arms, distribution of crossovers in Rec-1 approximates physical map. ES1 ME3 NA1. | |||||||
[C.elegansII] s180 : increases meiotic recombination in gene clusters, reduces recombination on chromosome arms; distribution of crossovers in Rec-1 approximates physical map. ES1, ME3. NA1. [Rose and Baillie 1979; Zetka and Rose 1995; KR] | |||||||
Strain (22) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00091998 | ||||||
00091999 | |||||||
00092000 | |||||||
Ortholog | chrI_pilon.g113 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | rec-1 affects the recombination frequency in the central gene cluster region of autosomes and has been shown to alter the distribution of genes on the genetic map of the X chromosome, also affects X-chromosome nondisjunction; does not appear to act pre-meiotically. | Paper_evidence | WBPaper00001046 | |||
WBPaper00002339 | |||||||
WBPaper00017219 | |||||||
Curator_confirmed | WBPerson48 | ||||||
WBPerson1843 | |||||||
Date_last_updated | 29 Sep 2015 00:00:00 | ||||||
Automated_description | Involved in meiotic DNA double-strand break formation involved in reciprocal meiotic recombination. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS (2) | ||||||
Corresponding_CDS_history | Y18H1A.7:wp96 | ||||||
Corresponding_transcript | Y18H1A.7a.1 | ||||||
Y18H1A.7b.1 | |||||||
Associated_feature | WBsf648913 | ||||||
WBsf982561 | |||||||
WBsf1009119 | |||||||
WBsf218932 | |||||||
Experimental_info | RNAi_result | WBRNAi00055631 | Inferred_automatically | RNAi_primary | |||
WBRNAi00084348 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00103863 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1028467 | ||||||
Expr1039252 | |||||||
Expr1159145 | |||||||
Expr2015290 | |||||||
Expr2033524 | |||||||
Drives_construct | WBCnstr00020890 | ||||||
WBCnstr00020891 | |||||||
WBCnstr00020892 | |||||||
Construct_product | WBCnstr00020890 | ||||||
WBCnstr00020892 | |||||||
Microarray_results | SMD_Y18H1A_67.B | ||||||
SMD_Y18H1A_67.M | |||||||
A_12_P119566 | |||||||
Aff_Y18H1A_67.M | |||||||
GPL14144_Y18H1A.7_560-619_0.908_1_A | |||||||
GPL19516_CGZ0043430 | |||||||
GPL21109_Y18H1A.7 | |||||||
GPL3518_CE21433 | |||||||
GPL8304_CE_WBGene00021211_A | |||||||
GPL8673_Y18H1A_7P00035 | |||||||
GPL8673_Y18H1A_7P00171 | |||||||
GPL8673_Y18H1A_7P00956 | |||||||
GPL9450_Y18H1A.7 | |||||||
cea2.p.19996 | |||||||
Expression_cluster (93) | |||||||
WBProcess | WBbiopr:00000109 | ||||||
Map_info | Map | I | Position | -18.5556 | |||
Well_ordered | |||||||
Positive | Inside_rearr | eDf24 | |||||
Positive_clone | Y18H1A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Mapping_data | Pos_neg_data | 8939 | |||||
8940 | |||||||
8941 | |||||||
8942 | |||||||
8943 | |||||||
Reference (28) | |||||||
Method | Gene |