WormBase Tree Display for Gene: WBGene00001483
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WBGene00001483 | SMap | S_parent | Sequence | C03C11 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fog | ||||||
Allele (37) | |||||||
Legacy_information | [C.elegansII] q469 : XX animals transformed into females, XO animals somatically male, make oocytes in germ line. q469/Df similar. No dominant phenotypes. ES3 (adult XX), ME0.OA>10: q441, q443, q470, q520fdi, q502uvp,oz137, oz147. [Ellis and Kimble 1995; RE] | ||||||
Strain (9) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (13) | |||||||
Ortholog (34) | |||||||
Paralog | WBGene00020380 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | fog-3 encodes a protein that has similarity, in its N-terminus, to the vertebrate Tob, BTG1, and BTG2 proteins that function in growth control and/or differentiation; in C. elegans, FOG-3 activity is required in the germ line throughout development for initiation and maintenance of spermatogenesis; fog-3 mRNA is expressed at highest levels in the L3, L4, and young adult stages of development, when spermatogenesis occurs; fog-3 transcription appears to be under the control of TRA-1A, which interacts with predicted TRA-1A binding sites in the fog-3 promoter in vitro. | Paper_evidence | WBPaper00003882 | |||
WBPaper00004256 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 27 Oct 2005 00:00:00 | ||||||
Automated_description | Predicted to enable transcription corepressor activity. Involved in cell fate specification; developmental process involved in reproduction; and positive regulation of oocyte development. Located in cytoplasm and nuclear periphery. Expressed in germ line. Is an ortholog of human TOB1 (transducer of ERBB2, 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C03C11.2 | |||||
Corresponding_transcript | C03C11.2.1 | ||||||
Other_sequence | AY589605.1 | ||||||
Associated_feature | WBsf979085 | ||||||
WBsf984884 | |||||||
WBsf218378 | |||||||
WBsf218379 | |||||||
Experimental_info | RNAi_result (11) | ||||||
Expr_pattern | Expr1244 | ||||||
Expr9348 | |||||||
Expr12584 | |||||||
Expr1027248 | |||||||
Expr1030885 | |||||||
Expr1143617 | |||||||
Expr2011867 | |||||||
Expr2030105 | |||||||
Drives_construct (15) | |||||||
Construct_product (16) | |||||||
Regulate_expr_cluster | WBPaper00048762:FOG-3_associated | ||||||
WBPaper00054792:FOG-3_interacting | |||||||
Microarray_results | SMD_C03C11.2 | ||||||
187972_at | |||||||
A_12_P105705 | |||||||
Aff_C03C11.2 | |||||||
GPL13394_WBGene00001483 | |||||||
GPL13914_C03C11.2 | |||||||
GPL14144_C03C11.2_10-69_0.896_11_A | |||||||
GPL14144_C03C11.2_174-233_0.924_6_C | |||||||
GPL14144_C03C11.2_309-368_0.779_40_B | |||||||
GPL19516_CGZ0002144 | |||||||
GPL21109_C03C11.2 | |||||||
GPL3518_CE07874 | |||||||
GPL8304_CE_WBGene00001483_A | |||||||
GPL8304_CE_WBGene00001483_B | |||||||
GPL8673_C03C11_2P00077 | |||||||
GPL8673_C03C11_2P00360 | |||||||
GPL8673_C03C11_2P00617 | |||||||
GPL9450_C03C11.2 | |||||||
cea2.c.00360 | |||||||
Expression_cluster (173) | |||||||
Interaction (64) | |||||||
Anatomy_function | WBbtf0506 | ||||||
Map_info | Map | I | Position | 4.49216 | Error | 0.029361 | |
Well_ordered | |||||||
Positive | Positive_clone | C03C11 | Person_evidence | WBPerson159 | |||
Author_evidence | Chen P-J | ||||||
Singal A | |||||||
Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Mapping_data | Multi_point (22) | ||||||
Pos_neg_data (23) | |||||||
Reference (105) | |||||||
Picture | WBPicture0000013095 | ||||||
Method | Gene |