WormBase Tree Display for Gene: WBGene00001446
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WBGene00001446 | SMap | S_parent | Sequence | W07E11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | flp-3 | Person_evidence | WBPerson369 | |||||
Sequence_name | W07E11.2 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_W07E11.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | flp-3 | ||||||||
DB_info | Database | AceView | gene | XK710 | |||||
WormQTL | gene | WBGene00001446 | |||||||
WormFlux | gene | WBGene00001446 | |||||||
NDB | locus_tag | CELE_W07E11.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001446|UniProtKB=Q23212 | |||||||
family | PTHR20986 | ||||||||
NCBI | gene | 181221 | |||||||
RefSeq | protein | NM_077293.8 | |||||||
SwissProt | UniProtAcc | Q23212 | |||||||
TREEFAM | TREEFAM_ID | TF316891 | |||||||
UniProt_GCRP | UniProtAcc | Q23212 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | flp | ||||||||
Allele (26) | |||||||||
Strain | WBStrain00037364 | ||||||||
WBStrain00055068 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00077619 | ||||||||
00077620 | |||||||||
00077621 | |||||||||
00077622 | |||||||||
00077623 | |||||||||
00077624 | |||||||||
00077625 | |||||||||
00108729 | |||||||||
Ortholog | WBGene00063133 | Caenorhabditis remanei | From_analysis | OMA | |||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WBGene00025134 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
OrthoMCL | |||||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WBGene00125283 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
chrX_pilon.g19847 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00001444 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00001457 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00001461 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | flp-3 encodes nine copies of a GTMRFamide-containing peptide that is predicted to function as a neuropeptide that inhibits pharyngeal action potential in a manner similar to octopamine without having a significant effect on basal resting membrane potential; flp-3 is expressed in three pairs of neurons IL1D, OLL, URB. | Paper_evidence | WBPaper00003889 | |||||
WBPaper00004931 | |||||||||
WBPaper00030992 | |||||||||
Curator_confirmed | WBPerson48 | ||||||||
WBPerson1843 | |||||||||
Date_last_updated | 09 Aug 2012 00:00:00 | ||||||||
Automated_description | Involved in negative regulation of action potential; neuropeptide signaling pathway; and regulation of pharyngeal pumping. Predicted to be located in extracellular region. Expressed in head; motor neurons; sensory neurons; somatic nervous system; and in male. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W07E11.2 | |||||||
Corresponding_transcript | W07E11.2.1 | ||||||||
Other_sequence | AF042389 | ||||||||
PSC03751_1 | |||||||||
CBC16500_1 | |||||||||
CJC06883_1 | |||||||||
HGC07030_1 | |||||||||
HG06566 | |||||||||
GW411138.1 | |||||||||
JI216353.1 | |||||||||
EF422867.1 | |||||||||
BXC03042_1 | |||||||||
Associated_feature | WBsf237830 | ||||||||
WBsf237831 | |||||||||
Experimental_info | RNAi_result | WBRNAi00054945 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019697 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054946 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027743 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (14) | |||||||||
Drives_construct | WBCnstr00005117 | ||||||||
WBCnstr00010910 | |||||||||
WBCnstr00036941 | |||||||||
WBCnstr00042539 | |||||||||
WBCnstr00042707 | |||||||||
Construct_product | WBCnstr00005799 | ||||||||
WBCnstr00036941 | |||||||||
WBCnstr00042539 | |||||||||
Antibody | WBAntibody00000611 | ||||||||
Microarray_results | SMD_W07E11.2 | ||||||||
193247_at | |||||||||
A_12_P115331 | |||||||||
Aff_W07E11.2 | |||||||||
GPL13394_WBGene00001446 | |||||||||
GPL13914_W07E11.2 | |||||||||
GPL14144_W07E11.2_273-332_0.944_3_C | |||||||||
GPL14144_W07E11.2_458-517_0.955_2_B | |||||||||
GPL14144_W07E11.2_480-539_0.956_1_A | |||||||||
GPL19516_CGZ0038713 | |||||||||
GPL21109_W07E11.2 | |||||||||
GPL3518_CE02373 | |||||||||
GPL8304_CE_WBGene00001446_A | |||||||||
GPL8673_W07E11_2P00026 | |||||||||
GPL8673_W07E11_2P00142 | |||||||||
GPL8673_W07E11_2P00187 | |||||||||
GPL9450_W07E11.2 | |||||||||
cea2.c.48398 | |||||||||
Expression_cluster (159) | |||||||||
Interaction (59) | |||||||||
Map_info | Map | X | Position | 1.73922 | Error | 0.001345 | |||
Positive | Positive_clone | W07E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4314 | |||||||
4879 | |||||||||
5561 | |||||||||
Reference (38) | |||||||||
Method | Gene |