WormBase Tree Display for Gene: WBGene00001830
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| WBGene00001830 | SMap | S_parent | Sequence | T06E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hcp-2 | Person_evidence | WBPerson537 | |||||
| Sequence_name | T06E4.1 | ||||||||
| Molecular_name | T06E4.1 | ||||||||
| T06E4.1.1 | |||||||||
| CE06368 | |||||||||
| Other_name | CELE_T06E4.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | hcp-2 | ||||||||
| DB_info | Database | AceView | gene | 5K129 | |||||
| WormQTL | gene | WBGene00001830 | |||||||
| WormFlux | gene | WBGene00001830 | |||||||
| NDB | locus_tag | CELE_T06E4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001830|UniProtKB=Q22257 | |||||||
| family | PTHR43939 | ||||||||
| NCBI | gene | 179353 | |||||||
| RefSeq | protein | NM_073088.5 | |||||||
| TREEFAM | TREEFAM_ID | TF351235 | |||||||
| TrEMBL | UniProtAcc | Q22257 | |||||||
| UniProt_GCRP | UniProtAcc | Q22257 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hcp | ||||||||
| Allele (77) | |||||||||
| Strain | WBStrain00032189 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00001086 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00001829 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00004874 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable actin filament binding activity and microfilament motor activity. Involved in chromosome segregation; meiotic spindle organization; and protein localization. Located in kinetochore. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T06E4.1 | |||||||
| Corresponding_transcript | T06E4.1.1 | ||||||||
| Associated_feature | WBsf647098 | ||||||||
| WBsf232278 | |||||||||
| WBsf232279 | |||||||||
| WBsf232280 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr1020970 | ||||||||
| Expr1031075 | |||||||||
| Expr1156255 | |||||||||
| Expr2012378 | |||||||||
| Expr2030614 | |||||||||
| Drives_construct | WBCnstr00036661 | ||||||||
| Construct_product | WBCnstr00036661 | ||||||||
| Antibody | WBAntibody00002972 | ||||||||
| Microarray_results | SMD_T06E4.1 | ||||||||
| 173260_s_at | |||||||||
| 177622_at | |||||||||
| 194214_x_at | |||||||||
| A_12_P104166 | |||||||||
| Aff_T06E4.1 | |||||||||
| GPL13394_WBGene00001830 | |||||||||
| GPL13914_T06E4.1 | |||||||||
| GPL14144_T06E4.1_3210-3269_0.844_43_C | |||||||||
| GPL14144_T06E4.1_3366-3425_0.859_34_B | |||||||||
| GPL14144_T06E4.1_3747-3806_0.892_17_A | |||||||||
| GPL19516_CGZ0033729 | |||||||||
| GPL21109_T06E4.1 | |||||||||
| GPL3518_CE06368 | |||||||||
| GPL8304_CE_WBGene00001830_A | |||||||||
| GPL8304_CE_WBGene00001830_B | |||||||||
| GPL8673_T06E4_1P02908 | |||||||||
| GPL8673_T06E4_1P03265 | |||||||||
| GPL8673_T06E4_1P03762 | |||||||||
| GPL9450_T06E4.1 | |||||||||
| cea2.p.123825 | |||||||||
| Expression_cluster (182) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Map | V | Position | 2.06215 | Error | 0.000798 | |||
| Positive | Positive_clone | T06E4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003772 | ||||||||
| WBPaper00004544 | |||||||||
| WBPaper00005486 | |||||||||
| WBPaper00006142 | |||||||||
| WBPaper00024319 | |||||||||
| WBPaper00024437 | |||||||||
| WBPaper00024863 | |||||||||
| WBPaper00025100 | |||||||||
| WBPaper00025115 | |||||||||
| WBPaper00026074 | |||||||||
| WBPaper00027235 | |||||||||
| WBPaper00031320 | |||||||||
| WBPaper00031491 | |||||||||
| WBPaper00031504 | |||||||||
| WBPaper00032153 | |||||||||
| WBPaper00033632 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00038682 | |||||||||
| WBPaper00041121 | |||||||||
| WBPaper00042793 | |||||||||
| WBPaper00043725 | |||||||||
| WBPaper00046652 | |||||||||
| WBPaper00047300 | |||||||||
| WBPaper00047908 | |||||||||
| WBPaper00048917 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062330 | |||||||||
| WBPaper00065033 | |||||||||
| WBPaper00065308 | |||||||||
| WBPaper00065685 | |||||||||
| Remark | Sequence connection from [Moore LL, Roth MB] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
