WormBase Tree Display for Gene: WBGene00001829
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WBGene00001829 | SMap | S_parent | Sequence | ZK1055 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | hcp-1 | Person_evidence | WBPerson537 | |||||
Sequence_name | ZK1055.1 | ||||||||
Molecular_name | ZK1055.1 | ||||||||
ZK1055.1.1 | |||||||||
CE18470 | |||||||||
Other_name | CELE_ZK1055.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | hcp-1 | ||||||||
DB_info | Database | AceView | gene | 5H79 | |||||
WormQTL | gene | WBGene00001829 | |||||||
WormFlux | gene | WBGene00001829 | |||||||
NDB | locus_tag | CELE_ZK1055.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001829|UniProtKB=O76447 | |||||||
family | PTHR34491 | ||||||||
NCBI | gene | 179049 | |||||||
RefSeq | protein | NM_072276.4 | |||||||
TREEFAM | TREEFAM_ID | TF101133 | |||||||
TrEMBL | UniProtAcc | O76447 | |||||||
UniProt_GCRP | UniProtAcc | O76447 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hcp | ||||||||
Allele (78) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Ortholog (30) | |||||||||
Paralog | WBGene00001830 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | hcp-1 encodes a homolog of the mammalian centromere protein-F (CENP-F) and is involved in mitotic chromosome segregation; hcp-1 functions in an ordered pathway consisting of two other CENP proteins encoded by hcp-3 and hcp-4 to control assembly of the kinetochore; hcp-1 localization to the kinetochore is dependent on hcp-3 and hcp-4. | Paper_evidence | WBPaper00003772 | |||||
WBPaper00004735 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Involved in chromosome segregation; organelle organization; and protein localization. Located in kinetochore; nucleus; and spindle. Expressed in AB and Psub1. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1055.1 | |||||||
Corresponding_transcript | ZK1055.1.1 | ||||||||
Other_sequence | CRC01217_1 | ||||||||
CBC04093_1 | |||||||||
CR00770 | |||||||||
FD514421.1 | |||||||||
CBC02068_1 | |||||||||
CSC00393_1 | |||||||||
Associated_feature | WBsf661379 | ||||||||
WBsf231892 | |||||||||
WBsf231893 | |||||||||
Experimental_info | RNAi_result (19) | ||||||||
Expr_pattern | Expr1191 | ||||||||
Expr3059 | |||||||||
Expr1014439 | |||||||||
Expr1031074 | |||||||||
Expr1162505 | |||||||||
Expr1200204 | |||||||||
Expr2012377 | |||||||||
Expr2030613 | |||||||||
Drives_construct | WBCnstr00020451 | ||||||||
WBCnstr00036662 | |||||||||
Construct_product | WBCnstr00000663 | ||||||||
WBCnstr00000893 | |||||||||
WBCnstr00017306 | |||||||||
WBCnstr00020451 | |||||||||
WBCnstr00036662 | |||||||||
Antibody | WBAntibody00000249 | ||||||||
WBAntibody00002971 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (196) | |||||||||
Interaction (72) | |||||||||
Map_info | Map | V | Position | 0.10906 | Error | 0.000539 | |||
Positive | Positive_clone | ZK1055 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference (31) | |||||||||
Remark | Sequence connection from [Moore LL, Roth MB] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |