WormBase Tree Display for Gene: WBGene00001829
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WBGene00001829 | SMap | S_parent | Sequence | ZK1055 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hcp | ||||||
Allele (78) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (16) | |||||||
Ortholog (30) | |||||||
Paralog | WBGene00001830 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||
WormBase-Compara | |||||||
Structured_description | Concise_description | hcp-1 encodes a homolog of the mammalian centromere protein-F (CENP-F) and is involved in mitotic chromosome segregation; hcp-1 functions in an ordered pathway consisting of two other CENP proteins encoded by hcp-3 and hcp-4 to control assembly of the kinetochore; hcp-1 localization to the kinetochore is dependent on hcp-3 and hcp-4. | Paper_evidence | WBPaper00003772 | |||
WBPaper00004735 | |||||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson567 | |||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Involved in chromosome segregation; organelle organization; and protein localization. Located in kinetochore; nucleus; and spindle. Expressed in AB and Psub1. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | ZK1055.1 | |||||
Corresponding_transcript | ZK1055.1.1 | ||||||
Other_sequence | CRC01217_1 | ||||||
CBC04093_1 | |||||||
CR00770 | |||||||
FD514421.1 | |||||||
CBC02068_1 | |||||||
CSC00393_1 | |||||||
Associated_feature | WBsf661379 | ||||||
WBsf231892 | |||||||
WBsf231893 | |||||||
Experimental_info | RNAi_result (19) | ||||||
Expr_pattern | Expr1191 | ||||||
Expr3059 | |||||||
Expr1014439 | |||||||
Expr1031074 | |||||||
Expr1162505 | |||||||
Expr1200204 | |||||||
Expr2012377 | |||||||
Expr2030613 | |||||||
Drives_construct | WBCnstr00020451 | ||||||
WBCnstr00036662 | |||||||
Construct_product | WBCnstr00000663 | ||||||
WBCnstr00000893 | |||||||
WBCnstr00017306 | |||||||
WBCnstr00020451 | |||||||
WBCnstr00036662 | |||||||
Antibody | WBAntibody00000249 | ||||||
WBAntibody00002971 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (196) | |||||||
Interaction (72) | |||||||
Map_info | Map | V | Position | 0.10906 | Error | 0.000539 | |
Positive | Positive_clone | ZK1055 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (31) | |||||||
Remark | Sequence connection from [Moore LL, Roth MB] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |