WormBase Tree Display for Gene: WBGene00020576

WBGene00020576 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 1
    Name: Sequence_name: T19D12.1
      Molecular_name (12)
      Other_name: CELE_T19D12.1 Accession_evidence: NDB BX284602
      Public_name: T19D12.1
    DB_info: Database: AceView gene 2G963
        WormQTL gene WBGene00020576
        NDB locus_tag CELE_T19D12.1
        Panther gene CAEEL|WormBase=WBGene00020576|UniProtKB=Q22579
          family PTHR37972
        NCBI gene 24104905
        RefSeq protein NM_001356859.4
            NM_001306588.3
            NM_001356860.4
            NM_001356861.5
        TrEMBL UniProtAcc A0A2C9C355
            A0A2C9C3B5
            A0A2C9C327
            Q22579
        UniProt_GCRP UniProtAcc Q22579
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (92)
    RNASeq_FPKM (74)
    GO_annotation: 00002892
    Ortholog: WBGene00164210 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00054137 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125399 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032397 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00042427 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CBOVI.g6649 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g17359 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g17360 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12633 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23451 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g23467 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25592 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7336 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16160 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g21780 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g10636 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g18759 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8494 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g8496 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_II.g5157 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12051 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00043.g2288 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13700 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_13705 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006312 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20273200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_20273500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4827 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00054143 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog: WBGene00016004 Caenorhabditis elegans From_analysis: Panther
      WBGene00019273 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020577 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020578 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T19D12.1a
      T19D12.1b
      T19D12.1c
      T19D12.1d
    Corresponding_transcript: T19D12.1a.1
      T19D12.1b.1
      T19D12.1c.1
      T19D12.1d.1
    Other_sequence: FD514309.1
      CSC01720_1
      CBC06992_1
    Associated_feature: WBsf717690
      WBsf221483
      WBsf221484
      WBsf221485
      WBsf221486
  Experimental_info: RNAi_result: WBRNAi00018841 Inferred_automatically: RNAi_primary
      WBRNAi00053530 Inferred_automatically: RNAi_primary
      WBRNAi00053528 Inferred_automatically: RNAi_primary
      WBRNAi00009184 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017344
      Expr1038966
      Expr1157096
      Expr2006257
      Expr2024475
    Drives_construct: WBCnstr00025038
    Construct_product: WBCnstr00025038
    Microarray_results: SMD_T19D12.1
      174683_at
      174684_s_at
      193822_at
      A_12_P116882
      A_12_P139840
      Aff_T19D12.1
      GPL14144_T19D12.1_4207-4266_0.556_923_B
      GPL19516_CGZ0027035
      GPL19516_CGZ0035535
      GPL21109_H43E16.1
      GPL21109_T19D12.1
      GPL3518_CE28677
      GPL8304_CE_WBGene00020576_A
      GPL8304_CE_WBGene00020576_B
      GPL8673_T19D12_1P04730
      GPL8673_T19D12_1P05120
      GPL8673_T19D12_1P05191
      GPL9450_T19D12.1
      cea2.3.24517
      cea2.3.24526
      cea2.d.05745
      cea2.p.47172
    Expression_cluster (226)
    Interaction (29)
  Map_info: Positive: Positive_clone: T19D12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -0.0451846
  Reference: WBPaper00065331
  Method: Gene