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WormBase Tree Display for Gene: WBGene00012366

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Name Class

WBGene00012366SMapS_parentSequenceW09G3
IdentityVersion3
NameCGC_namemaea-1Person_evidenceWBPerson625
WBPerson567
WBPerson2812
Sequence_nameW09G3.2
Molecular_nameW09G3.2
W09G3.2.1
CE16568
Other_nameCELE_W09G3.2Accession_evidenceNDBBX284601
Public_namemaea-1
DB_infoDatabaseAceViewgene1O400C
1O400
WormQTLgeneWBGene00012366
WormFluxgeneWBGene00012366
NDBlocus_tagCELE_W09G3.2
PanthergeneCAEEL|WormBase=WBGene00012366|UniProtKB=O18188
familyPTHR12170
NCBIgene173248
RefSeqproteinNM_061015.8
TREEFAMTREEFAM_IDTF314273
TrEMBLUniProtAccO18188
UniProt_GCRPUniProtAccO18188
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
221 Dec 2010 14:04:48WBPerson2970Name_changeCGC_namemaea-1
302 Mar 2018 11:09:16WBPerson4025EventSplit_intoWBGene00303084
Split_intoWBGene00303084
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmaea
Allele (75)
StrainWBStrain00003526
RNASeq_FPKM (74)
GO_annotation00031563
00031564
00031565
00031566
00031567
00031568
00031569
00119528
00119529
Contained_in_operonCEOP1724
OrthologWBGene00034368Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00056114Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00139529Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131097Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00192637Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WBGene00117406Pristionchus pacificusFrom_analysisOMA
WBGene00226520Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10374Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3063Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP28.g3866Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19578Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26087Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5964Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21111Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7150Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9228Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00107.g4516Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-maea-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold574.g4395Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold574.g4396Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00131.g5162Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_001784Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10740Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g18291Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10018500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2792Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00213147Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00238114Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00306063Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00262117Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285186Trichuris murisFrom_analysisWormBase-Compara
SGD:S000001359Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
FB:FBgn0051357Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-294Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:13731Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1891748Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1309877Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00020301Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of GID complex. Is an ortholog of human MAEA (macrophage erythroblast attacher, E3 ubiquitin ligase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW09G3.2
Corresponding_CDS_historyW09G3.2b:wp264
Corresponding_transcriptW09G3.2.1
Other_sequenceTcir_isotig20297
MHC11935_1
Associated_featureWBsf649720
WBsf220546
Experimental_infoRNAi_resultWBRNAi00092878Inferred_automaticallyRNAi_primary
WBRNAi00004460Inferred_automaticallyRNAi_primary
WBRNAi00036419Inferred_automaticallyRNAi_primary
WBRNAi00055064Inferred_automaticallyRNAi_primary
Expr_patternChronogram468
Expr6864
Expr1012843
Expr1035480
Expr1158601
Expr2013346
Expr2031578
Drives_constructWBCnstr00003984
Microarray_resultsSMD_W09G3.2
179211_s_at
A_12_P105693
A_12_P155390
A_12_P155391
Aff_W09G3.2
GPL13394_WBGene00012366
GPL13914_W09G3.2
GPL14144_W09G3.2_1239-1298_0.925_2_B
GPL14144_W09G3.2_81-140_0.874_25_A
GPL14144_W09G3.2_965-1024_0.926_1_C
GPL19516_CGZ0038950
GPL19516_CGZ0038957
GPL19516_CGZ0038958
GPL21109_W09G3.2
GPL21109_W09G3.8.1
GPL3518_CE16568
GPL8304_CE_WBGene00012366_A
GPL8673_W09G3_2P00014
GPL8673_W09G3_2P00235
GPL8673_W09G3_2P00920
GPL8673_W09G3_8P00159
GPL9450_W09G3.2
cea2.p.19578
Expression_cluster (106)
Interaction (33)
Map_infoMapIPosition21.9218Error0.028263
PositivePositive_cloneW09G3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00041549
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene