WormBase Tree Display for Gene: WBGene00020301
expand all nodes | collapse all nodes | view schema
| WBGene00020301 | SMap | S_parent | Sequence | T07D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gid-2 | Person_evidence | WBPerson48679 | |||||
| Sequence_name | T07D1.2 | ||||||||
| Molecular_name | T07D1.2a | ||||||||
| T07D1.2a.1 | |||||||||
| CE29467 | |||||||||
| T07D1.2b | |||||||||
| CE07469 | |||||||||
| T07D1.2c | |||||||||
| CE54357 | |||||||||
| T07D1.2b.1 | |||||||||
| T07D1.2c.1 | |||||||||
| Other_name | CELE_T07D1.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | gid-2 | ||||||||
| DB_info | Database | AceView | gene | XD50 | |||||
| WormQTL | gene | WBGene00020301 | |||||||
| WormFlux | gene | WBGene00020301 | |||||||
| NDB | locus_tag | CELE_T07D1.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020301|UniProtKB=Q22302 | |||||||
| family | PTHR12170 | ||||||||
| NCBI | gene | 180548 | |||||||
| RefSeq | protein | NM_001395783.1 | |||||||
| NM_001395784.1 | |||||||||
| NM_076043.7 | |||||||||
| TrEMBL | UniProtAcc | Q22302 | |||||||
| A0A8D9MH66 | |||||||||
| A0A8D9I9M5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q22302 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Jul 2021 01:21:32 | WBPerson1983 | Name_change | CGC_name | gid-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gid | ||||||||
| Allele (132) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00074837 | ||||||||
| 00074838 | |||||||||
| 00074839 | |||||||||
| 00074840 | |||||||||
| 00074841 | |||||||||
| 00124967 | |||||||||
| 00124968 | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00012366 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity. Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of GID complex. Expressed in E; Ea; and Ep. Is an ortholog of human RMND5A (required for meiotic nuclear division 5 homolog A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T07D1.2a | |||||||
| T07D1.2b | |||||||||
| T07D1.2c | |||||||||
| Corresponding_transcript | T07D1.2a.1 | ||||||||
| T07D1.2b.1 | |||||||||
| T07D1.2c.1 | |||||||||
| Other_sequence | Hbac_isotig06555 | ||||||||
| CK726170.1 | |||||||||
| WBC01397_1 | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035298 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052742 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3504 | ||||||||
| Expr1028307 | |||||||||
| Expr1038846 | |||||||||
| Expr1156349 | |||||||||
| Expr2005960 | |||||||||
| Expr2024176 | |||||||||
| Drives_construct | WBCnstr00011437 | ||||||||
| WBCnstr00025233 | |||||||||
| Construct_product | WBCnstr00025233 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | X | Position | -15.4807 | |||||
| Positive | Positive_clone | T07D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
