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WormBase Tree Display for Gene: WBGene00011606

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Name Class

WBGene00011606SMapS_parentSequenceT08D2
IdentityVersion2
NameCGC_nametmed-12Person_evidenceWBPerson451
Sequence_nameT08D2.1
Molecular_nameT08D2.1
T08D2.1.1
CE21168
Other_nameCELE_T08D2.1Accession_evidenceNDBBX284606
Public_nametmed-12
DB_infoDatabaseAceViewgeneXA798
XA823
WormQTLgeneWBGene00011606
WormFluxgeneWBGene00011606
NDBlocus_tagCELE_T08D2.1
PanthergeneCAEEL|WormBase=WBGene00011606|UniProtKB=A4F319
familyPTHR22811
NCBIgene188279
RefSeqproteinNM_075653.1
TREEFAMTREEFAM_IDTF314123
TrEMBLUniProtAccA4F319
UniProt_GCRPUniProtAccA4F319
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 Jan 2019 16:22:24WBPerson1983Name_changeCGC_nametmed-12
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtmed
Allele (12)
RNASeq_FPKM (74)
GO_annotation00004438
00004439
00004440
00004441
00004442
00004443
00004444
00004445
00004446
Ortholog (21)
ParalogWBGene00004766Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007743Caenorhabditis elegansFrom_analysisPanther
WBGene00009829Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010670Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019003Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013360Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022255Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in Golgi organization; endoplasmic reticulum to Golgi vesicle-mediated transport; and intracellular protein transport. Predicted to be located in intracellular membrane-bounded organelle. Is an ortholog of human TMED4 (transmembrane p24 trafficking protein 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST08D2.1
Corresponding_transcriptT08D2.1.1
Other_sequenceAS14020
HC07497
ACC15550_1
PT03471
EX543869.1
PTC02769_1
EX535089.1
XI04991
HG10165
XIC05662_1
Associated_feature (11)
Experimental_infoRNAi_resultWBRNAi00018439Inferred_automaticallyRNAi_primary
WBRNAi00026239Inferred_automaticallyRNAi_primary
WBRNAi00027465Inferred_automaticallyRNAi_primary
WBRNAi00035350Inferred_automaticallyRNAi_primary
WBRNAi00090918Inferred_automaticallyRNAi_primary
WBRNAi00052860Inferred_automaticallyRNAi_primary
Expr_patternExpr1013215
Expr1156462
Expr2006000
Expr2024216
Microarray_results (13)
Expression_cluster (53)
InteractionWBInteraction000115434
WBInteraction000115996
WBInteraction000144948
WBInteraction000172061
WBInteraction000188842
WBInteraction000188943
WBInteraction000188944
WBInteraction000189650
WBInteraction000191737
WBInteraction000197800
WBInteraction000204375
WBInteraction000209885
WBInteraction000211426
WBInteraction000228313
WBInteraction000238706
WBInteraction000245181
WBInteraction000260606
WBInteraction000261908
WBInteraction000263995
WBInteraction000306949
WBInteraction000312275
WBInteraction000331185
WBInteraction000341116
WBInteraction000341117
WBInteraction000341118
WBInteraction000341119
WBInteraction000348491
WBInteraction000362131
WBInteraction000367714
WBInteraction000381620
WBInteraction000399089
WBInteraction000411181
WBInteraction000415936
WBInteraction000417923
WBInteraction000430975
WBInteraction000449399
WBInteraction000459512
WBInteraction000464060
WBInteraction000582807
Map_infoPositivePositive_cloneT08D2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-20.7055
ReferenceWBPaper00038491
WBPaper00055090
MethodGene