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WormBase Tree Display for Gene: WBGene00009006

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Name Class

WBGene00009006SMapS_parentSequenceF21D5
IdentityVersion2
NameCGC_namepgm-3Person_evidenceWBPerson555
Sequence_nameF21D5.1
Molecular_nameF21D5.1
F21D5.1.1
CE03244
Other_nameCELE_F21D5.1Accession_evidenceNDBBX284604
Public_namepgm-3
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
213 Oct 2023 01:37:05WBPerson51134Name_changeCGC_namepgm-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpgm
Allele (38)
RNASeq_FPKM (74)
GO_annotation (14)
Contained_in_operonCEOP4300
Ortholog (46)
ParalogWBGene00012803Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013690Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019890Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionF21D5.1 encodes a putative phosphoacetylglucosamine mutase orthologousto human PGM3 (OMIM:172100); F21D5.1 is thought to catalyse the thirdstep of the hexosamine pathway to UDP-N-acetylglucosamine orUDP-N-acetylgalactosamine; F21D5.1 transcripts are enriched duringoogenesis; F21D5.1(RNAi) animals have an osmotically-sensitive embryoniclethal phenotype, presumably because of defects in chitin and eggshellsynthesis.Paper_evidenceWBPaper00006390
WBPaper00025054
WBPaper00028588
Curator_confirmedWBPerson567
Date_last_updated07 Apr 2007 00:00:00
Automated_descriptionPredicted to enable phosphoacetylglucosamine mutase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Human ortholog(s) of this gene implicated in cervical cancer; immunodeficiency 23; and teratoma. Is an ortholog of human PGM3 (phosphoglucomutase 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0111953Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8907)
DOID:3307Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8907)
DOID:4362Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8907)
Molecular_infoCorresponding_CDSF21D5.1
Corresponding_transcriptF21D5.1.1
Other_sequence (40)
Associated_featureWBsf646186
WBsf228731
WBsf228732
WBsf228733
Experimental_infoRNAi_resultWBRNAi00008674Inferred_automaticallyRNAi_primary
WBRNAi00025164Inferred_automaticallyRNAi_primary
WBRNAi00085828Inferred_automaticallyRNAi_primary
WBRNAi00045190Inferred_automaticallyRNAi_primary
WBRNAi00031215Inferred_automaticallyRNAi_primary
Expr_patternExpr1024271
Expr1033921
Expr1149130
Expr2002821
Expr2021038
Drives_constructWBCnstr00032531
Construct_productWBCnstr00032531
Microarray_results (19)
Expression_cluster (155)
InteractionWBInteraction000048489
WBInteraction000113604
WBInteraction000115409
WBInteraction000115775
WBInteraction000117550
WBInteraction000117806
WBInteraction000118283
WBInteraction000118284
WBInteraction000118360
WBInteraction000119760
WBInteraction000120338
WBInteraction000120616
WBInteraction000120765
WBInteraction000120932
WBInteraction000121403
WBInteraction000121784
WBInteraction000123176
WBInteraction000123177
WBInteraction000123473
WBInteraction000127265
WBInteraction000138862
WBInteraction000140434
WBInteraction000142335
WBInteraction000142877
WBInteraction000143478
WBInteraction000144894
WBInteraction000147505
WBInteraction000147586
WBInteraction000150907
WBInteraction000157615
WBInteraction000165212
WBInteraction000170735
WBInteraction000170952
WBInteraction000171118
WBInteraction000180179
WBInteraction000180341
WBInteraction000180897
WBInteraction000181322
WBInteraction000183712
WBInteraction000183842
WBInteraction000184517
WBInteraction000184803
WBInteraction000185117
WBInteraction000186142
WBInteraction000187554
WBInteraction000188063
WBInteraction000188197
WBInteraction000188233
WBInteraction000189077
WBInteraction000189472
WBInteraction000191741
WBInteraction000192240
WBInteraction000192244
WBInteraction000192670
WBInteraction000195958
WBInteraction000196623
WBInteraction000199539
WBInteraction000199540
WBInteraction000200547
WBInteraction000205631
WBInteraction000208455
WBInteraction000208551
WBInteraction000209103
WBInteraction000211390
WBInteraction000212575
WBInteraction000213599
WBInteraction000215793
WBInteraction000216276
WBInteraction000216472
WBInteraction000217265
WBInteraction000220322
WBInteraction000220600
WBInteraction000223643
WBInteraction000232282
WBInteraction000232327
WBInteraction000232855
WBInteraction000235483
WBInteraction000235981
WBInteraction000237082
WBInteraction000237259
WBInteraction000244506
WBInteraction000245632
WBInteraction000247893
WBInteraction000247911
WBInteraction000248904
WBInteraction000250120
WBInteraction000250189
WBInteraction000251688
WBInteraction000253737
WBInteraction000254395
WBInteraction000255613
WBInteraction000258336
WBInteraction000258414
WBInteraction000258832
WBInteraction000258898
WBInteraction000260482
WBInteraction000261361
WBInteraction000262583
WBInteraction000264503
WBInteraction000264710
WBInteraction000268722
WBInteraction000271537
WBInteraction000271894
WBInteraction000272070
WBInteraction000272088
WBInteraction000272342
WBInteraction000272393
WBInteraction000273924
WBInteraction000274076
WBInteraction000275938
WBInteraction000276438
WBInteraction000276809
WBInteraction000277150
WBInteraction000278402
WBInteraction000279434
WBInteraction000283081
WBInteraction000283236
WBInteraction000286446
WBInteraction000286674
WBInteraction000289353
WBInteraction000289790
WBInteraction000290552
WBInteraction000290939
WBInteraction000291117
WBInteraction000291252
WBInteraction000291652
WBInteraction000292893
WBInteraction000293379
WBInteraction000296492
WBInteraction000297066
WBInteraction000297483
WBInteraction000300667
WBInteraction000302145
WBInteraction000304326
WBInteraction000304400
WBInteraction000304437
WBInteraction000305311
WBInteraction000307090
WBInteraction000308863
WBInteraction000308934
WBInteraction000310526
WBInteraction000312315
WBInteraction000313967
WBInteraction000314486
WBInteraction000315394
WBInteraction000316400
WBInteraction000318505
WBInteraction000320241
WBInteraction000320426
WBInteraction000321947
WBInteraction000324254
WBInteraction000326205
WBInteraction000326394
WBInteraction000326874
WBInteraction000327098
WBInteraction000331969
WBInteraction000332206
WBInteraction000332526
WBInteraction000333615
WBInteraction000333928
WBInteraction000335361
WBInteraction000335870
WBInteraction000339073
WBInteraction000339400
WBInteraction000340323
WBInteraction000342423
WBInteraction000343943
WBInteraction000344044
WBInteraction000344244
WBInteraction000346048
WBInteraction000346295
WBInteraction000347489
WBInteraction000347636
WBInteraction000347916
WBInteraction000348533
WBInteraction000348552
WBInteraction000348889
WBInteraction000350782
WBInteraction000352168
WBInteraction000352748
WBInteraction000353541
WBInteraction000353673
WBInteraction000354572
WBInteraction000355159
WBInteraction000357642
WBInteraction000359363
WBInteraction000359811
WBInteraction000360386
WBInteraction000363106
WBInteraction000363295
WBInteraction000363427
WBInteraction000366420
WBInteraction000368472
WBInteraction000369522
WBInteraction000369652
WBInteraction000371857
WBInteraction000373791
WBInteraction000375764
WBInteraction000376622
WBInteraction000377554
WBInteraction000379515
WBInteraction000381549
WBInteraction000381574
WBInteraction000382711
WBInteraction000384895
WBInteraction000385465
WBInteraction000386193
WBInteraction000386845
WBInteraction000386910
WBInteraction000389816
WBInteraction000392166
WBInteraction000393331
WBInteraction000394713
WBInteraction000397598
WBInteraction000397896
WBInteraction000398155
WBInteraction000400918
WBInteraction000402420
WBInteraction000402904
WBInteraction000402932
WBInteraction000404383
WBInteraction000408834
WBInteraction000409527
WBInteraction000413274
WBInteraction000414037
WBInteraction000415612
WBInteraction000417685
WBInteraction000419393
WBInteraction000420478
WBInteraction000422860
WBInteraction000425495
WBInteraction000426221
WBInteraction000428324
WBInteraction000430910
WBInteraction000432025
WBInteraction000432490
WBInteraction000432889
WBInteraction000432890
WBInteraction000434811
WBInteraction000438143
WBInteraction000438983
WBInteraction000439026
WBInteraction000439374
WBInteraction000439587
WBInteraction000443268
WBInteraction000445625
WBInteraction000445627
WBInteraction000445651
WBInteraction000445804
WBInteraction000446961
WBInteraction000447438
WBInteraction000448770
WBInteraction000448907
WBInteraction000452762
WBInteraction000454465
WBInteraction000455005
WBInteraction000457005
WBInteraction000458595
WBInteraction000459823
WBInteraction000460213
WBInteraction000460265
WBInteraction000460669
WBInteraction000465543
WBInteraction000466899
WBInteraction000467143
WBInteraction000471006
WBInteraction000471127
WBInteraction000474779
WBInteraction000551662
WBInteraction000554094
WBInteraction000554469
WBInteraction000557889
WBInteraction000567662
WBInteraction000573661
WBInteraction000576582
WBInteraction000577869
WBInteraction000580629
WBInteraction000582789
WBInteraction000582872
Map_infoPositivePositive_cloneF21D5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV3.95739
Reference (4)
MethodGene