WormBase Tree Display for Gene: WBGene00007880

WBGene00007880 SMap: S_parent: Sequence: C33A12
  Identity: Version: 2
    Name: CGC_name: ndua-5 Person_evidence: WBPerson25803
            WBPerson545
      Sequence_name: C33A12.1
      Molecular_name: C33A12.1
        C33A12.1.1
        CE05347
      Other_name: CELE_C33A12.1 Accession_evidence: NDB BX284604
      Public_name: ndua-5
    DB_info: Database: AceView gene 4K286
        WormQTL gene WBGene00007880
        WormFlux gene WBGene00007880
        NDB locus_tag CELE_C33A12.1
        Panther gene CAEEL|WormBase=WBGene00007880|UniProtKB=Q18359
          family PTHR12653
        NCBI gene 177786
        RefSeq protein NM_069287.6
        SwissProt UniProtAcc Q18359
        TREEFAM TREEFAM_ID TF313785
        UniProt_GCRP UniProtAcc Q18359
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Jan 2023 20:48:33 WBPerson51134 Name_change: CGC_name: ndua-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ndua
    Allele (23)
    Strain: WBStrain00002888
    RNASeq_FPKM (74)
    GO_annotation: 00061016
      00061017
      00061018
      00061019
      00061020
      00061021
      00061022
      00061023
      00061024
      00115881
    Ortholog (37)
    Structured_description: Concise_description: C33A12.1 encodes the C. elegans ortholog of the NDUFA5/B13 subunit of the mitochondrial NADH dehydrogenase (ubiquinone) complex (complex I). Paper_evidence: WBPaper00005928
          Curator_confirmed: WBPerson1843
          Date_last_updated: 07 Nov 2006 00:00:00
      Automated_description: Predicted to be involved in respiratory electron transport chain. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in Alzheimer's disease. Is an ortholog of human NDUFA5 (NADH:ubiquinone oxidoreductase subunit A5). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:10652 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:7688)
  Molecular_info: Corresponding_CDS: C33A12.1
    Corresponding_transcript: C33A12.1.1
    Other_sequence: CSC02293_1
      Oden_isotig13435
      BMC04790_1
      CRC01734_1
      CK855425.1
      HCC02482_2
      AE04594
      JI178399.1
      Name_isotig03346
      CJC00019_1
      NBC00725_2
      HC04897
      AA901431.1
      Dviv_isotig25285
      ACC01561_1
      CV198674.1
      NB06922
      CGC00405_1
      OVC00765_1
      Tcol_isotig23465
      Hbac_isotig05491
      NBC00725_1
      HBC02585_1
      WBC01507_1
      HG02474
      JO468639.1
      SSC02979_1
      PP00790
      ASC00969_1
      CK850376.1
      MA02918
      PVC00010_1
      CK726336.1
      CK855484.1
      Tcol_isotig10299
      MAC02870_1
      HC01907
      Tcir_isotig15194
      NB07331
      HGC01826_1
      BXC01726_1
      Tcol_isotig10300
      RSC00166_1
      HCC02482_1
      Tcir_isotig17033
      MIC06889_1
      AE04847
      AS02580
      FD515198.1
      ACC02686_1
      FE909809.1
      Oden_isotig13434
      MI02133
      FE915794.1
      SS00100
      WBC02567_1
      HCC06295_1
      AYC02040_1
      EX916496.1
      MH09089
      CBC00294_1
    Associated_feature: WBsf652070
      WBsf997432
      WBsf997433
      WBsf1017971
      WBsf1017972
      WBsf1017973
      WBsf230585
  Experimental_info: RNAi_result (15)
    Expr_pattern: Chronogram1794
      Expr5405
      Expr1029208
      Expr1033412
      Expr1145739
      Expr2001329
      Expr2019552
    Drives_construct: WBCnstr00003407
      WBCnstr00033412
    Construct_product: WBCnstr00033412
    Microarray_results (19)
    Expression_cluster (116)
    Interaction: WBInteraction000042164
      WBInteraction000111664
      WBInteraction000111665
      WBInteraction000111666
      WBInteraction000111667
      WBInteraction000139213
      WBInteraction000149605
      WBInteraction000153654
      WBInteraction000155211
      WBInteraction000155212
      WBInteraction000155213
      WBInteraction000155214
      WBInteraction000155215
      WBInteraction000155216
      WBInteraction000155217
      WBInteraction000155218
      WBInteraction000155219
      WBInteraction000155220
      WBInteraction000155221
      WBInteraction000155222
      WBInteraction000155223
      WBInteraction000155224
      WBInteraction000155225
      WBInteraction000155226
      WBInteraction000155227
      WBInteraction000155228
      WBInteraction000155229
      WBInteraction000155230
      WBInteraction000155231
      WBInteraction000155232
      WBInteraction000155233
      WBInteraction000155234
      WBInteraction000155235
      WBInteraction000155236
      WBInteraction000155237
      WBInteraction000155826
      WBInteraction000155967
      WBInteraction000157409
      WBInteraction000157439
      WBInteraction000157440
      WBInteraction000157441
      WBInteraction000157442
      WBInteraction000157443
      WBInteraction000157444
      WBInteraction000157445
      WBInteraction000157446
      WBInteraction000157447
      WBInteraction000157448
      WBInteraction000157449
      WBInteraction000157450
      WBInteraction000157451
      WBInteraction000157452
      WBInteraction000157453
      WBInteraction000157454
      WBInteraction000157455
      WBInteraction000157520
      WBInteraction000157533
      WBInteraction000160182
      WBInteraction000175119
      WBInteraction000184958
      WBInteraction000195830
      WBInteraction000203254
      WBInteraction000209691
      WBInteraction000210104
      WBInteraction000212750
      WBInteraction000230714
      WBInteraction000240070
      WBInteraction000241898
      WBInteraction000251409
      WBInteraction000251561
      WBInteraction000256118
      WBInteraction000259105
      WBInteraction000264380
      WBInteraction000266633
      WBInteraction000273519
      WBInteraction000275249
      WBInteraction000302719
      WBInteraction000328084
      WBInteraction000333332
      WBInteraction000342070
      WBInteraction000345377
      WBInteraction000345617
      WBInteraction000379591
      WBInteraction000400523
      WBInteraction000405654
      WBInteraction000412929
      WBInteraction000414403
      WBInteraction000416978
      WBInteraction000418627
      WBInteraction000536238
      WBInteraction000536271
      WBInteraction000536276
      WBInteraction000536825
      WBInteraction000553174
      WBInteraction000559103
      WBInteraction000562018
      WBInteraction000563689
      WBInteraction000566343
      WBInteraction000566622
      WBInteraction000572490
      WBInteraction000583183
      WBInteraction000585106
      WBInteraction000586379
  Map_info: Map: IV Position: 4.29053
    Positive: Positive_clone: C33A12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005928
    WBPaper00031194
    WBPaper00038491
    WBPaper00041771
    WBPaper00049828
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene