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WormBase Tree Display for Gene: WBGene00010125

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Name Class

WBGene00010125EvidencePaper_evidenceWBPaper00005976
SMapS_parentSequenceF55G11
IdentityVersion2
NameCGC_namedod-22Person_evidenceWBPerson1157
Sequence_nameF55G11.5
Molecular_nameF55G11.5a
F55G11.5a.1
CE18751
F55G11.5b
CE44804
F55G11.5b.1
Other_nameCELE_F55G11.5Accession_evidenceNDBBX284604
Public_namedod-22
DB_infoDatabaseAceViewgene4N731
WormQTLgeneWBGene00010125
WormFluxgeneWBGene00010125
NDBlocus_tagCELE_F55G11.5
PanthergeneCAEEL|WormBase=WBGene00010125|UniProtKB=Q9XUE0
familyPTHR47155
NCBIgene178247
RefSeqproteinNM_001268760.2
NM_001268761.3
TREEFAMTREEFAM_IDTF316078
TrEMBLUniProtAccD5MCV0
Q9XUE0
UniProt_GCRPUniProtAccQ9XUE0
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
225 Aug 2004 11:12:51WBPerson1971Name_changeCGC_namedod-22
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdod
Allele (34)
StrainWBStrain00032269
RNASeq_FPKM (74)
GO_annotation00007684
00101704
00101705
00101706
OrthologWBGene00028637Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00028638Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00131905Caenorhabditis japonicaFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00140617Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151802Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00150984Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00163397Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00159041Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00148479Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00194595Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00139912Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00192294Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00212570Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00124456Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00069216Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00069215Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00080940Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00056828Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00061030Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00085374Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00042508Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CSP26.g13918Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g13919Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g13920Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g13921Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g16297Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g18324Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13791Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g13792Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g13793Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g13795Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6301Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11924Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g11926Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16238Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g21508Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g21510Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g27021Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8086Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8087Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8090Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8091Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8092Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8093Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8094Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8096Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14383Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g7889Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18342Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g19668Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g19669Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_IV.g14445Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g18205Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g18206Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00321.g9366Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00760.g15213Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00760.g15214Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00760.g15215Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00760.g15218Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02606Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_12651Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_015363Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_015366Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020178Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020179Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020766Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g12996Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23479Panagrellus redivivusFrom_analysisWormBase-Compara
chrIV_pilon.g12187Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00209779Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00291007Trichuris murisFrom_analysisWormBase-Compara
WBGene00302102Trichuris murisFrom_analysisWormBase-Compara
Paralog (35)
Structured_descriptionAutomated_descriptionInvolved in defense response to Gram-negative bacterium and innate immune response. Expressed in head neurons and rectal gland cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF55G11.5a
F55G11.5b
Corresponding_transcriptF55G11.5a.1
F55G11.5b.1
Other_sequenceCJC01390_1
Associated_feature (3)
Experimental_infoRNAi_resultWBRNAi00015752Inferred_automaticallyRNAi_primary
WBRNAi00075952Inferred_automaticallyRNAi_primary
WBRNAi00032903Inferred_automaticallyRNAi_primary
WBRNAi00092237Inferred_automaticallyRNAi_primary
WBRNAi00063217Inferred_automaticallyRNAi_primary
WBRNAi00048553Inferred_automaticallyRNAi_primary
Expr_patternExpr4726
Expr1026572
Expr1152337
Expr2011018
Expr2029255
Drives_constructWBCnstr00012203
WBCnstr00031647
Construct_productWBCnstr00012203
WBCnstr00014903
WBCnstr00031647
Microarray_results (19)
Expression_cluster (336)
InteractionWBInteraction000202560
WBInteraction000217594
WBInteraction000229119
WBInteraction000247667
WBInteraction000288541
WBInteraction000289053
WBInteraction000299437
WBInteraction000300578
WBInteraction000310118
WBInteraction000390816
WBInteraction000403608
WBInteraction000405981
WBInteraction000427493
WBInteraction000428461
WBInteraction000430566
WBInteraction000435096
WBInteraction000454639
WBInteraction000458058
WBInteraction000504929
WBInteraction000517589
WBInteraction000517592
WBInteraction000517593
WBInteraction000518621
WBInteraction000519497
WBInteraction000519501
WBInteraction000520521
WBInteraction000544068
WBInteraction000544071
WBInteraction000544072
WBInteraction000544073
WBInteraction000544078
WBInteraction000544080
WBInteraction000549476
WBInteraction000571165
Map_infoMapIVPosition6.77332Error0.028651
PositivePositive_cloneF55G11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (13)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene