WormBase Tree Display for Gene: WBGene00006584
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| WBGene00006584 | SMap | S_parent | Sequence | F42E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | tni-1 | Person_evidence | WBPerson300 | |||||
| Sequence_name | F42E11.4 | ||||||||
| Molecular_name | F42E11.4 | ||||||||
| F42E11.4.1 | |||||||||
| CE03311 | |||||||||
| Other_name | CELE_F42E11.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tni-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tni | ||||||||
| Allele (31) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted 242 aa protein, similarity to troponin I.tni-1:lacZ expressed in body wall muscle. [HK] | ||||||||
| Strain | WBStrain00051286 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067826 | ||||||||
| 00067827 | |||||||||
| 00067828 | |||||||||
| 00067829 | |||||||||
| 00067830 | |||||||||
| 00067831 | |||||||||
| 00067832 | |||||||||
| 00114385 | |||||||||
| Contained_in_operon | CEOPX169 | ||||||||
| Ortholog (52) | |||||||||
| Paralog | WBGene00006764 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006586 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006585 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | tni-1 encodes a member of the troponin family that affects body morphology, locomotion, egg laying, and epithelial morphogenesis in a large-scale RNAi analysis. | Paper_evidence | WBPaper00006395 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables troponin C binding activity. Involved in backward locomotion. Part of muscle thin filament tropomyosin. Expressed in several structures, including body wall musculature; gonad; non-striated muscle; rectal muscle; and in male. Human ortholog(s) of this gene implicated in several diseases, including arthrogryposis multiplex congenita; distal arthrogryposis type 2B1; and intrinsic cardiomyopathy (multiple). Is an ortholog of human TNNI1 (troponin I1, slow skeletal type); TNNI2 (troponin I2, fast skeletal type); and TNNI3 (troponin I3, cardiac type). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (10) | ||||||||
| Molecular_info | Corresponding_CDS | F42E11.4 | |||||||
| Corresponding_transcript | F42E11.4.1 | ||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf670031 | ||||||||
| WBsf716876 | |||||||||
| WBsf1006984 | |||||||||
| WBsf1006985 | |||||||||
| WBsf1006986 | |||||||||
| WBsf1023859 | |||||||||
| WBsf1023860 | |||||||||
| WBsf1023861 | |||||||||
| WBsf237958 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00012210 | ||||||||
| WBCnstr00012214 | |||||||||
| WBCnstr00034289 | |||||||||
| Construct_product | WBCnstr00034289 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (250) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | X | Position | 3.41297 | |||||
| Positive | Positive_clone | F42E11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Sequence connection from [Priest J, Allen TS]. krb 13/11/01 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
