WormBase Tree Display for Gene: WBGene00006585

WBGene00006585 SMap: S_parent: Sequence: T20B3
  Identity: Version: 1
    Name: CGC_name: tni-3 Person_evidence: WBPerson300
      Sequence_name: T20B3.2
      Molecular_name: T20B3.2
        T20B3.2.1
        CE20087
      Other_name: CELE_T20B3.2 Accession_evidence: NDB BX284605
      Public_name: tni-3
    DB_info: Database: AceView gene 5R314
        WormQTL gene WBGene00006585
        WormFlux gene WBGene00006585
        NDB locus_tag CELE_T20B3.2
        Panther gene CAEEL|WormBase=WBGene00006585|UniProtKB=Q9XUN9
          family PTHR13738
        NCBI gene 180127
        RefSeq protein NM_074849.9
        SwissProt UniProtAcc Q9XUN9
        TREEFAM TREEFAM_ID TF313374
        UniProt_GCRP UniProtAcc Q9XUN9
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tni
    Allele (63)
    Strain: WBStrain00049392
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (47)
    Paralog: WBGene00006584 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00006764 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00006586 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: tni-3 encodes one of the four elegans troponin I genes; tni-3 is required for coordinated movement, normal body and muscle morphology and for the proper contractions of the vulva and anus; CeTNI-3 interacts with both the body wall and pharynx troponin C; tni-3 is strongly expressed in body wall, head and vulval muscles. Paper_evidence: WBPaper00025009
          Curator_confirmed: WBPerson324
          Date_last_updated: 29 Jan 2007 00:00:00
      Automated_description: Enables troponin C binding activity. Involved in egg-laying behavior; muscle contraction; and post-embryonic body morphogenesis. Located in sarcomere. Expressed in body wall musculature; non-striated muscle; rectal muscle; and in male. Is an ortholog of human TNNI1 (troponin I1, slow skeletal type). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T20B3.2
    Corresponding_transcript: T20B3.2.1
    Other_sequence (66)
    Associated_feature: WBsf047564
      WBsf047565
      WBsf653495
  Experimental_info: RNAi_result: WBRNAi00033405 Inferred_automatically: RNAi_primary
      WBRNAi00061229 Inferred_automatically: RNAi_primary
      WBRNAi00077598 Inferred_automatically: RNAi_primary
      WBRNAi00053595 Inferred_automatically: RNAi_primary
      WBRNAi00066673 Inferred_automatically: RNAi_primary
      WBRNAi00078124 Inferred_automatically: RNAi_primary
      WBRNAi00078123 Inferred_automatically: RNAi_primary
      WBRNAi00018885 Inferred_automatically: RNAi_primary
      WBRNAi00066586 Inferred_automatically: RNAi_primary
    Expr_pattern (11)
    Drives_construct: WBCnstr00012212
      WBCnstr00012216
      WBCnstr00034288
    Construct_product: WBCnstr00013929
      WBCnstr00034288
    Microarray_results (20)
    Expression_cluster (201)
    Interaction (31)
  Map_info: Map: V Position: 11.2175 Error: 0.002532
    Positive: Positive_clone: T20B3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (11)
  Remark: Sequence connection from [Priest J, Allen TS]. krb 13/11/01
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene