WormBase Tree Display for Gene: WBGene00003162
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| WBGene00003162 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F20H11 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | mdh-2 | Person_evidence | WBPerson676 | |||||
| Sequence_name | F20H11.3 | ||||||||
| Molecular_name | F20H11.3 | ||||||||
| F20H11.3.1 | |||||||||
| CE09512 | |||||||||
| Other_name | mdh-1 | ||||||||
| CELE_F20H11.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | mdh-2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 18 Aug 2010 11:14:24 | WBPerson2970 | Name_change (2) | ||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mdh | ||||||||
| Allele (21) | |||||||||
| Possibly_affected_by | WBVar02157829 | ||||||||
| WBVar02157830 | |||||||||
| Strain | WBStrain00001399 | ||||||||
| Component_of_genotype | WBGenotype00000142 | ||||||||
| WBGenotype00000143 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (23) | |||||||||
| Contained_in_operon | CEOP3392 | ||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00002262 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | mdh-2 encodes a homolog of malate dehydrogenase that is predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| WBPaper00018469 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 26 Oct 2010 00:00:00 | ||||||||
| Automated_description | Enables L-malate dehydrogenase activity. Involved in malate metabolic process. Located in mitochondrion. Used to study hyperglycemia. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 51. Is an ortholog of human MDH2 (malate dehydrogenase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:4195 | Homo sapiens | Paper_evidence | WBPaper00062228 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 01 Aug 2022 00:00:00 | ||||||||
| Potential_model | DOID:0080433 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6971) | |||||
| Models_disease_asserted | WBDOannot00001306 | ||||||||
| WBDOannot00001307 | |||||||||
| Molecular_info | Corresponding_CDS | F20H11.3 | |||||||
| Corresponding_transcript | F20H11.3.1 | ||||||||
| Other_sequence (160) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Chronogram476 | ||||||||
| Expr5812 | |||||||||
| Expr9520 | |||||||||
| Expr12928 | |||||||||
| Expr1027511 | |||||||||
| Expr1031497 | |||||||||
| Expr1149091 | |||||||||
| Expr2013466 | |||||||||
| Expr2031700 | |||||||||
| Drives_construct | WBCnstr00002289 | ||||||||
| Construct_product | WBCnstr00014085 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (187) | |||||||||
| Interaction (239) | |||||||||
| Map_info | Map | III | Position | -1.04922 | Error | 0.004775 | |||
| Positive | Positive_clone | F20H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (26) | |||||||||
| Remark | Sequence connection from [Walstrom KM] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
