WormBase Tree Display for Gene: WBGene00002262
expand all nodes | collapse all nodes | view schema
| WBGene00002262 | SMap | S_parent | Sequence | F13D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ldh-1 | |||||||
| Sequence_name | F13D12.2 | ||||||||
| Molecular_name | F13D12.2a | ||||||||
| F13D12.2a.1 | |||||||||
| CE02181 | |||||||||
| F13D12.2b | |||||||||
| CE52349 | |||||||||
| F13D12.2b.1 | |||||||||
| Other_name | LDH | Accession_evidence | EMBL | L43563 | |||||
| U15420 | |||||||||
| CELE_F13D12.2 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | ldh-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ldh | ||||||||
| Allele (53) | |||||||||
| Strain | WBStrain00002751 | ||||||||
| WBStrain00036859 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00003162 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | ldh-1 is orthologous to the human gene LACTATE DEHYDROGENASE B (LDHB; OMIM:150100), which when mutated leads to lactate dehydrogenase-B deficiency. | Paper_evidence | WBPaper00004424 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables L-lactate dehydrogenase activity. Predicted to be involved in lactate metabolic process and pyruvate metabolic process. Predicted to be located in mitochondrion. Expressed in tail. Is an ortholog of several human genes including LDHA (lactate dehydrogenase A); LDHB (lactate dehydrogenase B); and LDHC (lactate dehydrogenase C). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | EFO:MONDO:0002412 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6535) | ||||
| Molecular_info | Corresponding_CDS | F13D12.2a | |||||||
| F13D12.2b | |||||||||
| Corresponding_transcript | F13D12.2a.1 | ||||||||
| F13D12.2b.1 | |||||||||
| Other_sequence (188) | |||||||||
| Associated_feature | WBsf658267 | ||||||||
| WBsf658268 | |||||||||
| WBsf658269 | |||||||||
| WBsf981292 | |||||||||
| WBsf989867 | |||||||||
| WBsf1013298 | |||||||||
| WBsf222183 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00027805 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013213 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110147 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044499 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1072 | ||||||||
| Expr5749 | |||||||||
| Expr1013453 | |||||||||
| Expr1031332 | |||||||||
| Expr1148449 | |||||||||
| Expr2013028 | |||||||||
| Expr2031260 | |||||||||
| Drives_construct | WBCnstr00003279 | ||||||||
| WBCnstr00036349 | |||||||||
| Construct_product | WBCnstr00036349 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (217) | |||||||||
| Interaction (41) | |||||||||
| Map_info | Map | II | Position | 4.00379 | Error | 0.005319 | |||
| Positive | Positive_clone | F13D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (18) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
