WormBase Tree Display for Gene: WBGene00001481
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WBGene00001481 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y54E10A | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fog | ||||||
Reference_allele | WBVar00144581 | ||||||
Allele (139) | |||||||
Possibly_affected_by | WBVar02158428 | ||||||
Legacy_information | e1959sd : homozygous XX animals transformed into fertile females; homozygous and heterozygous XO animals are somatically male with both sperm and oocytes in germline. ES2 (adults). NA3. | ||||||
See also e1959 | |||||||
[C.elegansII] e1959sd : homozygous XX animals transformed into fertile females; homozygous XO animals are somatically male, make oocytes in germ line; heterozygous XO animals are somatically male with both sperm and oocytes in germline. ES2 (adults). OA>10: e2121, e1959, e2122, q155, q253ts (fertile at 15C). [Barton and Kimble 1990; Ellis and Kimble 1995; JK; RE] | |||||||
Strain | WBStrain00022517 | ||||||
WBStrain00022535 | |||||||
WBStrain00022541 | |||||||
WBStrain00022595 | |||||||
WBStrain00022628 | |||||||
WBStrain00022633 | |||||||
WBStrain00022660 | |||||||
WBStrain00022661 | |||||||
WBStrain00004543 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (26) | |||||||
Ortholog (37) | |||||||
Paralog | WBGene00000770 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00000771 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00000772 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Concise_description | fog-1 encodes a cytoplasmic polyadenylation element binding (CPEB) protein; FOG-1 is required for specification of the sperm fate; FOG-1 binds its own 3'-UTR and fog-1 expression is directly regulated by FBF-1 and FBF-2. | Paper_evidence | WBPaper00004396 | |||
WBPaper00005045 | |||||||
WBPaper00026645 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 11 Apr 2014 00:00:00 | ||||||
Automated_description | Enables mRNA 3'-UTR binding activity. Involved in cell fate specification; germ-line sex determination; and spermatogenesis. Located in cytoplasm and nuclear periphery. Expressed in germ line. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y54E10A.4a | |||||
Y54E10A.4b | |||||||
Y54E10A.4c | |||||||
Y54E10A.4d | |||||||
Corresponding_transcript | Y54E10A.4a.1 | ||||||
Y54E10A.4a.2 | |||||||
Y54E10A.4b.1 | |||||||
Y54E10A.4c.1 | |||||||
Y54E10A.4d.1 | |||||||
Other_sequence | CRC04533_1 | ||||||
MH07524 | |||||||
Associated_feature (6) | |||||||
Experimental_info | RNAi_result (15) | ||||||
Expr_pattern (11) | |||||||
Construct_product | WBCnstr00022307 | ||||||
Regulate_expr_cluster | WBPaper00048762:FOG-1_associated | ||||||
Antibody | WBAntibody00000874 | ||||||
WBAntibody00000966 | |||||||
Microarray_results (27) | |||||||
Expression_cluster (148) | |||||||
Interaction (73) | |||||||
Map_info | Map | I | Position | -4.47297 | Error | 0.001409 | |
Well_ordered | |||||||
Positive | Positive_clone | Y54E10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Negative | Outside_rearr | sDf4 | |||||
Mapping_data | 2_point | 2502 | |||||
Multi_point (19) | |||||||
Pos_neg_data | 3183 | ||||||
8068 | |||||||
5693 | |||||||
6211 | |||||||
6228 | |||||||
6566 | |||||||
6627 | |||||||
8064 | |||||||
8533 | |||||||
Reference (141) | |||||||
Picture | WBPicture0000013095 | ||||||
Method | Gene |