WormBase Tree Display for Gene: WBGene00001072
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WBGene00001072 | SMap | S_parent | Sequence | T14B4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | dpy-10 | Person_evidence | WBPerson261 | |||||
Sequence_name | T14B4.7 | ||||||||
Molecular_name | T14B4.7 | ||||||||
T14B4.7.1 | |||||||||
CE51880 | |||||||||
Other_name | rol-7 | ||||||||
CELE_T14B4.7 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | dpy-10 | ||||||||
DB_info | Database (9) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 06 Mar 2018 14:35:46 | WBPerson4025 | Event | Split_into | WBGene00302993 | ||||
Split_into | WBGene00302993 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dpy | ||||||||
Reference_allele | WBVar00142982 | ||||||||
Allele (52) | |||||||||
Possibly_affected_by | WBVar02152815 | ||||||||
WBVar02152872 | |||||||||
WBVar02157712 | |||||||||
WBVar02158431 | |||||||||
WBVar02158465 | |||||||||
WBVar02158466 | |||||||||
WBVar02158831 | |||||||||
Legacy_information | e128 : small dumpy (non-roller); sometimes poor freezing. ES3 (all stages) ME1. NA > 10 (e223 sc48 (left roller dumpy) sc30ts (left roller dumpy at 25x) sc? (pka rol-7) etc.). | ||||||||
[C.elegansII] e128 : small dumpy (non-roller); sometimes poor survival from freezing; non-null. Suppresses some alleles of glp-1, emb-5.ES3 (all stages) ME1. OA>10: e223, sc48 (left roller dumpy), sc30ts (pka rol-7, left roller dumpy at 25C),cn64 (dominant left roller), q291, s364fdi etc.Cloned: encodes collagen 41% identical to DPY-2. e128 is splicing defect, cg36 (left roller dumpy, ochre, probable null). [Brenner 1974; Levy et al. 1993; CH] | |||||||||
Strain (668) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Contained_in_operon | CEOP5607 | ||||||||
Ortholog (22) | |||||||||
Paralog (161) | |||||||||
Structured_description | Concise_description | A cuticle collagen protein that afffects body morphology and movement and genetically interacts with the sqt-1 collagen gene. | Paper_evidence | WBPaper00001792 | |||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to be a structural constituent of collagen and cuticulin-based cuticle. Involved in several processes, including cuticle development involved in collagen and cuticulin-based cuticle molting cycle; locomotion; and post-embryonic body morphogenesis. Predicted to be part of collagen trimer. Used to study skin disease. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Experimental_model | DOID:37 | Homo sapiens | Paper_evidence | WBPaper00061220 | ||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 02 May 2022 00:00:00 | ||||||||
Models_disease_asserted | WBDOannot00001178 | ||||||||
Molecular_info | Corresponding_CDS | T14B4.7 | |||||||
Corresponding_CDS_history | T14B4.7:wp86 | ||||||||
T14B4.7a:wp257 | |||||||||
T14B4.7a:wp264 | |||||||||
T14B4.7b:wp97 | |||||||||
T14B4.7b:wp257 | |||||||||
T14B4.7c:wp264 | |||||||||
Corresponding_transcript | T14B4.7.1 | ||||||||
Corresponding_transcript_history | T14B4.7b:wp264 | ||||||||
Other_sequence | MHC07417_1 | ||||||||
MH05682 | |||||||||
PPC08679_1 | |||||||||
Associated_feature (4) | |||||||||
Experimental_info | RNAi_result (35) | ||||||||
Expr_pattern | Expr1022469 | ||||||||
Expr1030680 | |||||||||
Expr1156899 | |||||||||
Expr2011055 | |||||||||
Expr2029292 | |||||||||
Drives_construct | WBCnstr00037099 | ||||||||
Construct_product | WBCnstr00037099 | ||||||||
Regulate_expr_cluster | WBPaper00035873:dpy-10_regulated | ||||||||
Microarray_results (26) | |||||||||
Expression_cluster (277) | |||||||||
Interaction (195) | |||||||||
WBProcess | WBbiopr:00000124 | ||||||||
Map_info | Map | II | Position | 0 | |||||
Well_ordered | |||||||||
Positive | Inside_rearr | mnDf40 | |||||||
mC6 | |||||||||
Positive_clone | T14B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
ZK857 | |||||||||
Mapping_data (3) | |||||||||
Landmark_gene | |||||||||
Reference (205) | |||||||||
Method | Gene |