WormBase Tree Display for Gene: WBGene00001481
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WBGene00001481 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y54E10A | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | fog-1 | Person_evidence | WBPerson261 | |||||
Sequence_name | Y54E10A.4 | ||||||||
Molecular_name (13) | |||||||||
Other_name | cpb-4 | ||||||||
CELE_Y54E10A.4 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | fog-1 | ||||||||
DB_info | Database | AceView | gene | 1D785 | |||||
WormQTL | gene | WBGene00001481 | |||||||
WormFlux | gene | WBGene00001481 | |||||||
NDB | locus_tag | CELE_Y54E10A.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001481|UniProtKB=G5EBS6 | |||||||
family | PTHR12566 | ||||||||
NCBI | gene | 171895 | |||||||
RefSeq | protein | NM_001313541.3 | |||||||
NM_001313540.3 | |||||||||
NM_001381585.1 | |||||||||
NM_001381586.3 | |||||||||
TREEFAM | TREEFAM_ID | TF317658 | |||||||
TrEMBL | UniProtAcc | A0A0K3ATT1 | |||||||
G5EBS6 | |||||||||
Q95XX9 | |||||||||
A0A0K3AQU4 | |||||||||
UniProt_GCRP | UniProtAcc | G5EBS6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fog | ||||||||
Reference_allele | WBVar00144581 | ||||||||
Allele (139) | |||||||||
Possibly_affected_by | WBVar02158428 | ||||||||
Legacy_information | e1959sd : homozygous XX animals transformed into fertile females; homozygous and heterozygous XO animals are somatically male with both sperm and oocytes in germline. ES2 (adults). NA3. | ||||||||
See also e1959 | |||||||||
[C.elegansII] e1959sd : homozygous XX animals transformed into fertile females; homozygous XO animals are somatically male, make oocytes in germ line; heterozygous XO animals are somatically male with both sperm and oocytes in germline. ES2 (adults). OA>10: e2121, e1959, e2122, q155, q253ts (fertile at 15C). [Barton and Kimble 1990; Ellis and Kimble 1995; JK; RE] | |||||||||
Strain | WBStrain00022517 | ||||||||
WBStrain00022535 | |||||||||
WBStrain00022541 | |||||||||
WBStrain00022595 | |||||||||
WBStrain00022628 | |||||||||
WBStrain00022633 | |||||||||
WBStrain00022660 | |||||||||
WBStrain00022661 | |||||||||
WBStrain00004543 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (26) | |||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00000770 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000771 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000772 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | fog-1 encodes a cytoplasmic polyadenylation element binding (CPEB) protein; FOG-1 is required for specification of the sperm fate; FOG-1 binds its own 3'-UTR and fog-1 expression is directly regulated by FBF-1 and FBF-2. | Paper_evidence | WBPaper00004396 | |||||
WBPaper00005045 | |||||||||
WBPaper00026645 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 11 Apr 2014 00:00:00 | ||||||||
Automated_description | Enables mRNA 3'-UTR binding activity. Involved in cell fate specification; germ-line sex determination; and spermatogenesis. Located in cytoplasm and nuclear periphery. Expressed in germ line. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y54E10A.4a | |||||||
Y54E10A.4b | |||||||||
Y54E10A.4c | |||||||||
Y54E10A.4d | |||||||||
Corresponding_transcript | Y54E10A.4a.1 | ||||||||
Y54E10A.4a.2 | |||||||||
Y54E10A.4b.1 | |||||||||
Y54E10A.4c.1 | |||||||||
Y54E10A.4d.1 | |||||||||
Other_sequence | CRC04533_1 | ||||||||
MH07524 | |||||||||
Associated_feature | WBsf028075 | ||||||||
WBsf643133 | |||||||||
WBsf656105 | |||||||||
WBsf656106 | |||||||||
WBsf217376 | |||||||||
WBsf217377 | |||||||||
Experimental_info | RNAi_result (15) | ||||||||
Expr_pattern (11) | |||||||||
Construct_product | WBCnstr00022307 | ||||||||
Regulate_expr_cluster | WBPaper00048762:FOG-1_associated | ||||||||
Antibody | WBAntibody00000874 | ||||||||
WBAntibody00000966 | |||||||||
Microarray_results | SMD_Y54E10A_156.D | ||||||||
177117_at | |||||||||
A_12_P145725 | |||||||||
A_12_P145726 | |||||||||
Aff_Y54E10A_156.D | |||||||||
GPL13394_WBGene00001481 | |||||||||
GPL13914_Y54E10A.4 | |||||||||
GPL14144_Y54E10A.4b_1017-1076_0.889_38_C | |||||||||
GPL14144_Y54E10A.4b_1110-1169_0.903_29_A | |||||||||
GPL14144_Y54E10A.4b_1236-1295_0.886_40_B | |||||||||
GPL19516_CGZ0049017 | |||||||||
GPL19516_CGZ0049018 | |||||||||
GPL21109_Y54E10A.4a | |||||||||
GPL3518_CE27479 | |||||||||
GPL3518_CE27480 | |||||||||
GPL8304_CE_WBGene00001481_A | |||||||||
GPL8304_CE_WBGene00001481_B | |||||||||
GPL8673_Y54E10A_4aP00089 | |||||||||
GPL8673_Y54E10A_4aP00573 | |||||||||
GPL8673_Y54E10A_4aP01045 | |||||||||
GPL8673_Y54E10A_4bP00364 | |||||||||
GPL8673_Y54E10A_4bP00475 | |||||||||
GPL8673_Y54E10A_4bP00544 | |||||||||
GPL9450_Y54E10A.4a | |||||||||
GPL9450_Y54E10A.4b | |||||||||
cea2.d.07001 | |||||||||
cea2.d.45063 | |||||||||
Expression_cluster (148) | |||||||||
Interaction (73) | |||||||||
Map_info | Map | I | Position | -4.47297 | Error | 0.001409 | |||
Well_ordered | |||||||||
Positive | Positive_clone | Y54E10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Negative | Outside_rearr | sDf4 | |||||||
Mapping_data (3) | |||||||||
Reference (141) | |||||||||
Picture | WBPicture0000013095 | ||||||||
Method | Gene |