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WormBase Tree Display for Gene: WBGene00044442

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Name Class

WBGene00044442SMapS_parentSequenceT08A9
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (16)
StrainWBStrain00032697
RNASeq_FPKM (74)
OrthologWBGene00051351Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00153617Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
Csp11.Scaffold629.g12492Caenorhabditis tropicalisFrom_analysisWormBase-Compara
FL83_00200Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024749Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_X0202900Caenorhabditis inopinataFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in intestine; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; dpy-10; and eat-2 based on RNA-seq and microarray studies. Is affected by nine chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST08A9.13
Corresponding_transcriptT08A9.13.1
Associated_featureWBsf1005806
WBsf1005807
WBsf237572
Experimental_infoRNAi_resultWBRNAi00018423Inferred_automaticallyRNAi_primary
WBRNAi00075982Inferred_automaticallyRNAi_primary
WBRNAi00052830Inferred_automaticallyRNAi_primary
Expr_patternExpr1024740
Expr1156424
Expr2005987
Expr2024202
Drives_constructWBCnstr00023556
Construct_productWBCnstr00023556
Microarray_results (15)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045774:clk-1_upregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00051137:Orsay-virus_upregulated_rde-1(ne219)
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00056284:ints-5(RNAi)_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056868:P.aeruginosa_upregulated_smallRNA
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060526:plp-1(ok2155)_downregulated
WBPaper00061340:FLP
WBPaper00061340:RID
WBPaper00061340:RIH
WBPaper00061341:28C_24h_upregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00065029:cadmium_upregulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065158:AFD_enriched
WBPaper00065841:31_0
WBPaper00065841:84_0
WBPaper00065841:107_0
WBPaper00065841:128_0
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4386_cluster_1_5
cgc4489_group_19
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Embryo_A_Class
WBPaper00031003:hlh_1_enriched
WBPaper00032062:age_regulated_genes
WBPaper00034661:AgNPs_upregulated
WBPaper00035873:dpy-10_regulated
WBPaper00035892:Y.pestis_regulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040876:mir-35_downregulated
WBPaper00041207:CE_dauer_up
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00044091:Bpseudomallei_repressed_8h
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00056330:mrps-5(RNAi)_upregulated
Map_infoPositivePositive_cloneT08A9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-1.76302
MethodGene