WormBase Tree Display for Gene: WBGene00044003

WBGene00044003 SMap: S_parent: Sequence: Y41E3
  Identity: Version: 1
    Name: Sequence_name: Y41E3.18
      Molecular_name: Y41E3.18
        Y41E3.18.1
        CE43604
      Other_name: CELE_Y41E3.18 Accession_evidence: NDB BX284604
      Public_name: Y41E3.18
    DB_info: Database: AceView gene 4P826
        WormFlux gene WBGene00044003
        NDB locus_tag CELE_Y41E3.18
        Panther gene CAEEL|WormBase=WBGene00044003|UniProtKB=Q5FC17
          family PTHR12277
        NCBI gene 3565105
        RefSeq protein NM_001028291.4
        TREEFAM TREEFAM_ID TF314365
        TrEMBL UniProtAcc Q5FC17
        UniProt_GCRP UniProtAcc Q5FC17
    Species: Caenorhabditis elegans
    History: Version_change: 1 23 Nov 2004 16:39:16 WBPerson1983 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (75)
    RNASeq_FPKM (74)
    GO_annotation: 00081320
      00081321
      00081322
      00081323
      00081324
    Ortholog (48)
    Paralog: WBGene00008222 Caenorhabditis elegans From_analysis: Panther
      WBGene00008497 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00008498 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018131 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022140 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022393 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00045192 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable palmitoyl-(protein) hydrolase activity. Predicted to be involved in macromolecule depalmitoylation. Predicted to be located in endosome membrane and plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y41E3.18
    Corresponding_CDS_history: Y41E3.18:wp201
    Corresponding_transcript: Y41E3.18.1
    Other_sequence: Tcir_isotig07307
      CRC12062_1
      JO470923.1
      Dviv_isotig21319
      JI164252.1
      Tcol_isotig15528
    Associated_feature: WBsf998681
      WBsf1018728
  Experimental_info: RNAi_result: WBRNAi00020503 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018938
      Expr1159891
      Expr2025686
    Microarray_results (24)
    Expression_cluster: WBPaper00032528:L3_depleted
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00040560:hpl-2_embryo_downregulated
      WBPaper00042194:nhr-114(RNAi)_upregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00044037:eat-2_regulated_nhr-62_dependent
      WBPaper00044037:eat-2_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:rising_dev_expression
      WBPaper00046805:P-granule-RNAi_upregulated_Set1
      WBPaper00049377:MWCNT_upregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049920:Glucose-Diet_upregulated_N2
      WBPaper00050231:male_enriched
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:body-muscle_enriched
      WBPaper00050990:body-muscle_expressed
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053318:Aging_downregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_downregulated_mRNA
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00054872:egl-9(sa307)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055648:sperm_expressed
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056284:ints-9(RNAi)_upregulated
      WBPaper00056290:hsp-6(mg585)_downregulated
      WBPaper00057068:numr-1(RNAi)_upregulated_Cadmium
      WBPaper00058955:heatshock_upregulated_CE
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00060445:ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060661:hypoxia_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061424:Diet_MYb131_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061479:prg-1(tm872)_upregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062456:doxycycline_upregulated_CB4856_transcript
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064539:nhr-114(gk849)_downregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065841:80_0
      WBPaper00065841:146_0
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00066085:hda-3(ok1991)_upregulated
      WBPaper00066110:Cisplatin_upregulated_diploid
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      cgc4489_group_18
      WBPaper00042548:miRISC_enriched
      WBPaper00045673:colistin_downregulated
      WBPaper00045807:microcystin-LR_upregulated
      [cgc6390]:mixed_spermatogenesis-somatic
    Interaction: WBInteraction000585350
  Map_info: Positive: Positive_clone: Y41E3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 12.8267
  Reference: WBPaper00062625
  Method: Gene