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WormBase Tree Display for Gene: WBGene00022816

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Name Class

WBGene00022816SMapS_parentSequenceCHROMOSOME_III
IdentityVersion3
NameCGC_namefbn-1Person_evidence (3)
Sequence_nameZK783.1
Molecular_name (27)
Other_namelet-821
cpg-16Paper_evidenceWBPaper00053350
CELE_ZK783.1Accession_evidenceNDBBX284603
Public_namefbn-1
DB_infoDatabaseAceViewgene3I729
WormQTLgeneWBGene00022816
WormFluxgeneWBGene00022816
OMIMdisease154700
gene134797
612570
NDBlocus_tagCELE_ZK783.1
PanthergeneCAEEL|WormBase=WBGene00022816|UniProtKB=I6Z0I7
familyPTHR24039
NCBIgene176076
RefSeqproteinNM_001276783.3
NM_001276787.4
NM_001276782.4
NM_001276789.4
NM_001276785.3
NM_001276780.3
NM_001276786.3
NM_066269.6
NM_001276788.3
TrEMBLUniProtAccI7J4C9
I7LFE6
I7K4J6
I7LHV9
I7J4C8
Q23587
I6Z0I7
I7K4J2
I7LHV8
UniProt_GCRPUniProtAccI6Z0I7
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:06WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 Jul 2005 14:07:57WBPerson2970Name_changeCGC_namefbn-1
320 May 2019 14:10:26WBPerson1983Name_changeCGC_namefbn-1
Other_namelet-821
StatusLive
Gene_info (9)
Disease_infoExperimental_modelDOID:65Homo sapiensPaper_evidenceWBPaper00046588
Curator_confirmedWBPerson324
Date_last_updated26 Oct 2018 00:00:00
Potential_model (13)
Disease_relevanceMutations in the human extracellular matrix protein fibrillin-1 (FBN1) lead to Marfan syndrome and several other disorders of connective tissue and skin; Both Marfan and Weill-Marchesani syndromes are characterized by abnormalities in connective tissue leading to heart, eye and skeletal abnormalities; FBN1 gene mutations also cause acromicric dysplasia characterized by severely short stature, short limbs and stiff joints; FBN1 gene mutations also cause MASS syndrome, involving abnormalities of the mitral heart valve, aorta, skeleton and skin; FBN1 gene mutations may also be involved in Shprintzen-Goldberg syndrome in infants which involves premature fusion of certain bones of the skull, and skeletal and skin abnormalities; in elegans mutations in fbn-1/fibrillin1 cause defects in molting.Homo sapiensPaper_evidenceWBPaper00026763
Accession_evidenceOMIM154700
134797
Curator_confirmedWBPerson324
Date_last_updated09 Dec 2013 00:00:00
Models_disease_assertedWBDOannot00000253
Molecular_infoCorresponding_CDSZK783.1a
ZK783.1b
ZK783.1d
ZK783.1e
ZK783.1f
ZK783.1g
ZK783.1h
ZK783.1j
ZK783.1k
Corresponding_CDS_historyZK783.1:wp206
ZK783.1i:wp275
Corresponding_transcriptZK783.1a.1
ZK783.1b.1
ZK783.1d.1
ZK783.1e.1
ZK783.1f.1
ZK783.1g.1
ZK783.1h.1
ZK783.1j.1
ZK783.1k.1
Other_sequence (20)
Associated_feature (22)
Experimental_infoRNAi_result (22)
Expr_patternExpr15951
Expr1025080
Expr1040095
Expr1163127
Expr2011446
Expr2029684
Drives_constructWBCnstr00042617
Construct_productWBCnstr00014819
WBCnstr00042617
Microarray_results (30)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00032528:L3_enriched
WBPaper00035197:fer-1_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038289:oocyte_protein
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040285:H2S_12hr_downregulated
WBPaper00042477:rsr-2(RNAi)_downregulated_RNAseq
WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
WBPaper00042561:smg-2(RNAi)_downregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00043945:MeHg_upregulated
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044260:nicotic-acid_downregulated
WBPaper00044426:rotenone_5day_downregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045420:fertilization_downregulated_protein
WBPaper00045521:Gender_Neutral
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046024:sleep_downregulated_oscillating
WBPaper00046121:ecdoderm_unique
WBPaper00046499:AMPK_regulated
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00046805:csr-1(RNAi)_downregulated_Set2
WBPaper00046887:WNT-target
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00048690:gonad-hermaphrodite-biased
WBPaper00048988:neuron_expressed
WBPaper00049098:heat-induced_hrde-1(tm1200)
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049594:osm-9(ok1677)_NaCl(200mM)_upregulate
WBPaper00049594:osm-9(ok1677)_upregulated
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050193:cec-4(ok3124)_downregulated_L1
WBPaper00050193:dpy-27(RNAi)_downregulated_L1
WBPaper00050193:met-2(n4256)set-25(n5021)_downregulated_L1
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050903:mir-35-41(nDf50)_25C_downregulated
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00051021:4-bromodiphenyl-ether_downregulated
WBPaper00051305:vit-2(ac3)_upregulated
WBPaper00051352:Long-Term-Association-Memory_upregulated
WBPaper00051371:Orsay-virus-infection_upregulated_rde-1(ne219)
WBPaper00051558:aging_regulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:alovudine_72h_regulated
WBPaper00053302:stavudine_72h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053402:his-3(RNAi)_upregulated
WBPaper00053657:N2_M.humicola-infection_24hr
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:sod-2(ok1030)_upregulated
WBPaper00053814:15C_downregulated_OP50
WBPaper00054192:cold-shock_downregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_downregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055969:electromagnetic-field_downregulated
WBPaper00055971:nhl-2(ok818)_20C_upregulated
WBPaper00056039:ptl-1(ok621)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056165:MINA-1_interacting_mRNA
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056169:rrf-3(pk1426)_upregulated_L1
WBPaper00056169:rrf-3(pk1426)_upregulated_L3
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_downregulated
WBPaper00056330:glycine_downregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056446:hsb-1(cg116)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056617:adr-1_upregulated_L4_transcript
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00057149:prgn-1(tm985)_downregulated
WBPaper00057154:HeatShock_upregulated_mRNA
WBPaper00057265:metaformin_upregulated_OP50
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00057347:nhr-14(tm1473)_downreglated
WBPaper00058648:Y37A1B.5(RNAi)_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058725:sftb-1(cer39)_downregulated
WBPaper00058948:npr-8(ok1439)_upregulated_OP50
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00059224:tph-1(mg280)_upregulated
WBPaper00059231:alh-6(lax105)_D3Adult_downregulated
WBPaper00059231:alh-6(lax105)_L4_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
WBPaper00059739:hira-1(gk835598)_upregulated_L4
WBPaper00059754:C.neoformans_H99_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060224:atf-6(ok551)_upregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060273:vrk-1(RNAi)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
WBPaper00060445:ikb-1(nr2027)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_downregulated_L1
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_downregulated_L4
WBPaper00060661:sensory-neuron_enriched
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060703:nas-38(ok3407)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:HB115_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:F_U
WBPaper00061340:G2_and_W_blasts
WBPaper00061340:hyp4_hyp5_hyp6
WBPaper00061340:hyp7_AB_lineage
WBPaper00061340:hyp7_C_lineage
WBPaper00061340:K_Kprime
WBPaper00061340:Parents_of_PHsh_hyp8_hyp9
WBPaper00061340:P_cell
WBPaper00061340:T
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061405:S.aureus_downregulated_starvation
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061479:hda-1(ne4747)_upregulated
WBPaper00061479:hda-1(ne4748)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:mlt-9_22518-F33D4.6_14044
WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
WBPaper00061699:daf-18(ok480)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062193:daf-16(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062237:dnj-21(RNAi)_upregulated_protein
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062446:nhr-8(ok186)_upregulated
WBPaper00062456:doxycycline_upregulated_N2_protein
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062534:fat-P-80_downregulated
WBPaper00062534:fat-P-80_downregulated_ech-6(RNAi)
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_protein
WBPaper00064005:starvation_downregulated_N2_protein
WBPaper00064055:trl-1(cas1077)_upregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064156:lipl-4(overexpress)_downregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00064871:hypoxia_downregulated_F2
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00064999:miR-229-64-65-66_upregulated
WBPaper00065029:cadmium_upregulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:N2_N.ironsii_regulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day1_25C
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065315:mating_upregulated_Day2-7
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065392:Lb.gasseri_downregulated
WBPaper00065560:E.coli-HB101_downregulated_F3
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065841:1_0
WBPaper00065841:13_0
WBPaper00065841:13_1
WBPaper00065841:30_1
WBPaper00065841:57_0
WBPaper00065945:global-rpoa-2(-)_downregulated_transcript
WBPaper00065984:pals-17(syb3980)_downregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066004:tdp-1(csb38)_upregulated
WBPaper00066005:RAGA-1_degradation_somatic_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4386_cluster_6_1
cgc4489_group_11
cgc4489_group_20
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026952:class_F
WBPaper00029437:dcr-1_upregulated
WBPaper00030985:Enterococcus_faecalis_downregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031832:slr-2_regulated
WBPaper00032948:FedUp
WBPaper00034739:N2lessDR1350
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_E
WBPaper00036383:ash-2_Day8_regulated
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038304:octr-1_regulated
WBPaper00039866:ClassComp_daf-19_upregulated
WBPaper00039866:SAM_daf-19_upregulated
WBPaper00040185:nhr-23(RNAi)_downregulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00045960:L4-lethargus_downregulated
WBPaper00046548:dafachronic-acid_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
WBPaper00056330:mrps-5(RNAi)_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc6390]:Cluster_B
Interaction (23)
Map_infoMapIIIPosition-0.655224Error0.002689
PositivePositive_cloneZK783Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5355
4789
Pseudo_map_position
Reference (19)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene