WormBase Tree Display for Gene: WBGene00021691

WBGene00021691 SMap: S_parent: Sequence: Y48G8AL
  Identity: Version: 1
    Name: Sequence_name: Y48G8AL.13
      Molecular_name: Y48G8AL.13a
        Y48G8AL.13a.1
        CE22187
        Y48G8AL.13b
        CE50279
        Y48G8AL.13a.2
        Y48G8AL.13a.3
        Y48G8AL.13b.1
      Other_name: CELE_Y48G8AL.13 Accession_evidence: NDB BX284601
      Public_name: Y48G8AL.13
    DB_info: Database: AceView gene 1B698
        WormQTL gene WBGene00021691
        WormFlux gene WBGene00021691
        NDB locus_tag CELE_Y48G8AL.13
        Panther gene CAEEL|WormBase=WBGene00021691|UniProtKB=Q9BL09
          family PTHR13439
        NCBI gene 171699
        RefSeq protein NM_001306507.4
            NM_058435.9
        TrEMBL UniProtAcc Q9BL09
            W6RR25
        UniProt_GCRP UniProtAcc Q9BL09
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (133)
    Strain: WBStrain00037274
    RNASeq_FPKM (74)
    GO_annotation: 00091752
      00091753
      00091754
      00091755
      00091756
      00091757
      00091758
      00091759
      00125950
    Ortholog (28)
    Paralog: WBGene00010828 Caenorhabditis elegans From_analysis: Panther
      WBGene00013407 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018318 Caenorhabditis elegans From_analysis: Panther
      WBGene00019686 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in membrane organization and phospholipid homeostasis. Predicted to be located in plasma membrane. Is an ortholog of human TLCD2 (TLC domain containing 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (5)
  Experimental_info: RNAi_result: WBRNAi00056964 Inferred_automatically: RNAi_primary
      WBRNAi00020761 Inferred_automatically: RNAi_primary
      WBRNAi00116434 Inferred_automatically: RNAi_primary
      WBRNAi00020762 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020354
      Expr1039502
      Expr1160413
      Expr2007695
      Expr2025937
    Microarray_results (23)
    Expression_cluster: WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00040990:PA14_upregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00044260:1-methylnicotinamide_downregulated
      WBPaper00044260:nicotic-acid_downregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044743:wdr-23_neuron_upregulated
      WBPaper00045314:S.aureus-induced_N2
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045521:Spermatogenic
      WBPaper00046499:AMPK_regulated
      WBPaper00046795:starvation_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:intestine_enriched
      WBPaper00051265:F4_hrde-1(tm1200)_downregulated
      WBPaper00051558:aging_regulated
      WBPaper00051558:fog-2(q71)_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053599:mitosis_vs_meiosis_downregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
      WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:sperm_expressed
      WBPaper00056034:pals-25(jy9)_upregulated
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056275:P.aeruginosa_downregulated
      WBPaper00056275:P.aeruginosa_downregulated_pmk-1(km25)_dependent
      WBPaper00056275:P.aeruginosa_upregulated
      WBPaper00056443:DietaryRestriction_upregulated
      WBPaper00056826:SGP_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057254:MWCNT_upregulated_mRNA
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058958:100mGy-irradiation-72h_upregulated
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059754:E.faecalis_OG1RF_upregulated
      WBPaper00059895:wounding_upregulated
      WBPaper00060014:set-2(zr2012)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061274:hypergravity_15xg_downregulated
      WBPaper00061274:microgravity_downregulated
      WBPaper00061340:M1_parent
      WBPaper00061340:Neuroblast_AVG_RIR
      WBPaper00061340:Parent_of_K_Kprime
      WBPaper00061527:172183_at-176110_at
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:etr-1(lq61)_downregulated
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064871:hypoxia_downregulated_F3
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065373:sek-1(km4)_downregulated_cisplatin
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      cgc4489_group_12
      WBPaper00025032:cluster_162
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00032948:StarveUp2
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00036123:Cadmium_regulated
      WBPaper00036286:Pattern_I
      WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated
      WBPaper00037695:WC_5-day
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041207:CE_dauer_up
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041960:N2_fasting_upregulated_9hto12h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045263:nuo-6(qm200)_downregulated
      WBPaper00045960:L1-L4-lethargus_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00048624:hlh-25(ok1710)_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5376]:let-60(G12V)-regulated_genes
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(101_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
  Map_info: Positive: Positive_clone: Y48G8AL Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -16.2902
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00064339
  Method: Gene