Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00020164

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00020164SMapS_parentSequenceT02G5
IdentityVersion2
NameSequence_nameT02G5.4
Molecular_nameT02G5.4
Other_nameCELE_T02G5.4Accession_evidenceNDBBX284602
Public_nameT02G5.4
DB_infoDatabaseAceViewgene2H373
WormQTLgeneWBGene00020164
WormFluxgeneWBGene00020164
NDBlocus_tagCELE_T02G5.4
NCBIgene187992
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 May 2013 16:18:41WBPerson615EventChanged_classCDSPseudogene
StatusLive
Gene_infoBiotypeSO:0000336
Allele (35)
StrainWBStrain00037346
RNASeq_FPKM (74)
Ortholog (5)
ParalogWBGene00002183Caenorhabditis elegansFrom_analysisInparanoid_8
Structured_descriptionAutomated_descriptionEnriched in germ line; intestine; and muscle cell based on RNA-seq and microarray studies. Is affected by several genes including daf-16; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including manganese chloride; D-glucose; and bisphenol S based on RNA-seq; proteomic; and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS_historyT02G5.4:wp227
T02G5.4:wp230
Corresponding_pseudogeneT02G5.4
Other_sequenceJI168261.1
HG02281
ES742581.1
CBC01982_1
CRC04894_1
Associated_featureWBsf657201
WBsf657793
WBsf657794
WBsf657795
WBsf657796
WBsf657797
Experimental_infoExpr_patternExpr1010961
Expr1038768
Expr1155860
Microarray_results (13)
Expression_clusterWBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00035073:mitochondria_protein
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00044037:eat-2_downregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00045774:clk-1_upregulated
WBPaper00046121:mesoderm_unique
WBPaper00046509:lin-35(n745)_downregulated
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00048611:MnCl2_downregulated
WBPaper00048923:Aging_regulated
WBPaper00048971:daf-16(mgDf50)_downregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049098:hrde-1(tm1200)-induced_15C
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049954:BPS_downregulated
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050599:nicotine(0.01mM)_upregulated
WBPaper00050712:RC301_vs_DA650_4h-PA_upregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:downregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00051039:germline_enriched
WBPaper00051265:F1_hrde-1(tm1200)_upregulated
WBPaper00051265:F1_morc-1(tm6048)_upregulated
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot267)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:alovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_fed-L1_Truseq
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:25C_upregulated_OP50
WBPaper00053814:25C_upregulated_PY79
WBPaper00054571:BPA_F3_germline_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056165:mina-1(ok1521)_upregulated_transcript
WBPaper00056471:flcn-1(ok975)_downregulated
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated
WBPaper00057140:pptr-1(tm3103)_upregulated
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_upregulated_endo-siRNA_targets
WBPaper00057288:Cold_upregulated_transcript
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058725:sftb-1(cer39)_downregulated
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00059739:hira-1(gk835598)_upregulated_L4
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060224:atf-6(ok551)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:hypergravity_15xg_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:C16A11.5-C16C8.13
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062440:crh-1(n3315)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064107:lin-52(3A)_vs_lin-52(WT)_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_3
WBPaper00005124:estrogen_10-5M_regulated
WBPaper00025032:cluster_8
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00029437:dcr-1_downregulated
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031060:2-deoxy-D-glucose_downregulated
WBPaper00036383:ash-2_Day8_regulated
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_allantoin_upregulated
WBPaper00057098:SiO2-nanoparticles_downregulated
Interaction (94)
Map_infoPositivePositive_cloneT02G5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII0.493298
ReferenceWBPaper00026800
WBPaper00029292
WBPaper00038491
WBPaper00042257
MethodGene