WormBase Tree Display for Gene: WBGene00019157

WBGene00019157 SMap: S_parent: Sequence: H05C05
  Identity: Version: 1
    Name: Sequence_name: H05C05.1
      Molecular_name: H05C05.1a
        H05C05.1a.1
        CE54176
        H05C05.1c
        CE54110
        H05C05.1c.1
      Other_name: CELE_H05C05.1 Accession_evidence: NDB BX284603
      Public_name: H05C05.1
    DB_info: Database: AceView gene 3E45
            3E49
        WormQTL gene WBGene00019157
        WormFlux gene WBGene00019157
        NDB locus_tag CELE_H05C05.1
        Panther gene CAEEL|WormBase=WBGene00019157|UniProtKB=H2L0A8
          family PTHR23236
        NCBI gene 259329
        RefSeq protein NM_001381794.3
            NM_001384046.1
        TREEFAM TREEFAM_ID TF350062
        TrEMBL UniProtAcc Q9TXU2
            H2L0A8
        UniProt_GCRP UniProtAcc H2L0A8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (331)
    RNASeq_FPKM (74)
    GO_annotation: 00124064
    Ortholog (23)
    Paralog: WBGene00008688 Caenorhabditis elegans From_analysis: Panther
      WBGene00011730 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable nucleic acid binding activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H05C05.1a
      H05C05.1c
    Corresponding_CDS_history: H05C05.1a:wp130
      H05C05.1a:wp275
      H05C05.1b:wp275
      H05C05.1c:wp275
    Corresponding_transcript: H05C05.1a.1
      H05C05.1c.1
    Other_sequence: MH05107
      AS17533
      MC04367
      CBC07178_1
    Associated_feature (12)
  Experimental_info: RNAi_result: WBRNAi00006577 Inferred_automatically: RNAi_primary
      WBRNAi00049299 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027582
      Expr1038271
      Expr1153043
      Expr2004521
      Expr2022746
    Microarray_results (25)
    Expression_cluster: WBPaper00027057:DCR-1_interacting_embryo
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00035269:cde-1_regulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00044037:eat-2_downregulated
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045971:tunicamycin_upregulated_control
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00047131:daf-2(e1370)_downregulated_N2-background
      WBPaper00048988:neuron_expressed
      WBPaper00049368:daf-2(e1370)_downregulated
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050412:cco-1(RNAi)_upregulated_N2
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050514:CEBP-1_interacting
      WBPaper00050686:glp-1(e2141)_downregulated
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:epidermis_nucleus_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:isp-1(qm150)_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055013:HMG-3_interacting_protein
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055226:ADR-2_target_N2
      WBPaper00055334:DLC-1_interacting
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056826:SGP_biased
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058725:sftb-1(cer39)_downregulated
      WBPaper00058725:sftb-1(cer39)_upregulated
      WBPaper00058958:100mGy-irradiation-72h_upregulated
      WBPaper00059254:CSR-1_interacting
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059605:MUT-16_interacting
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
      WBPaper00061340:RME_LR_parent
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061527:pro-3_11683-C44E4.1_9745
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064055:trl-1(cas1077)_upregulated_non-starved
      WBPaper00064055:trl-1(cas1077)_upregulated_starved
      WBPaper00064071:NHR-49_interacting
      WBPaper00064080:let-7_miRNA_interacting
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064130:Beta-Amyloid_upregulated_protein
      WBPaper00064871:hypoxia_upregulated_F1
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065158:AFD_enriched
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065373:sek-1(km4)_upregulated_Ref
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      WBPaper00025032:cluster_102
      WBPaper00035479:daf-16(RNAi)_upregulated
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00048989:N2_allantoin_upregulated
    Interaction (21)
  Map_info: Positive: Positive_clone: H05C05 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -8.37479
  Method: Gene