WormBase Tree Display for Gene: WBGene00011730
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| WBGene00011730 | SMap | S_parent | Sequence | T12D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | drr-2 | Person_evidence | WBPerson1157 | |||||
| Sequence_name | T12D8.2 | ||||||||
| Molecular_name | T12D8.2 | ||||||||
| T12D8.2.1 | |||||||||
| CE16399 | |||||||||
| Other_name | CELE_T12D8.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | drr-2 | ||||||||
| DB_info | Database | AceView | gene | 3O734 | |||||
| WormQTL | gene | WBGene00011730 | |||||||
| WormFlux | gene | WBGene00011730 | |||||||
| NDB | locus_tag | CELE_T12D8.2 | |||||||
| NCBI | gene | 259546 | |||||||
| RefSeq | protein | NM_067417.4 | |||||||
| TREEFAM | TREEFAM_ID | TF354331 | |||||||
| TrEMBL | UniProtAcc | O45781 | |||||||
| UniProt_GCRP | UniProtAcc | O45781 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 Aug 2005 14:07:05 | WBPerson2970 | Name_change | CGC_name | drr-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | drr | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00036332 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00035206 | ||||||||
| 00035207 | |||||||||
| 00035208 | |||||||||
| 00035209 | |||||||||
| 00035210 | |||||||||
| 00035211 | |||||||||
| 00035212 | |||||||||
| 00035213 | |||||||||
| 00118967 | |||||||||
| 00118968 | |||||||||
| Contained_in_operon | CEOP3818 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00008688 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00011155 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00011156 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00019157 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Part of polysome. Expressed in several structures, including coelomocyte; excretory canal; neurons; ventral nerve cord; and vulva. Human ortholog(s) of this gene implicated in Williams-Beuren syndrome. Is an ortholog of human EIF4H (eukaryotic translation initiation factor 4H). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1928 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12741) | ||||
| Molecular_info | Corresponding_CDS | T12D8.2 | |||||||
| Corresponding_transcript | T12D8.2.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf651589 | ||||||||
| WBsf981653 | |||||||||
| WBsf227782 | |||||||||
| WBsf227783 | |||||||||
| WBsf227784 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr9027 | ||||||||
| Expr1019228 | |||||||||
| Expr1035156 | |||||||||
| Expr1156792 | |||||||||
| Expr2011096 | |||||||||
| Expr2029332 | |||||||||
| Drives_construct | WBCnstr00007956 | ||||||||
| WBCnstr00007958 | |||||||||
| WBCnstr00007959 | |||||||||
| WBCnstr00013681 | |||||||||
| WBCnstr00030434 | |||||||||
| Construct_product | WBCnstr00007956 | ||||||||
| WBCnstr00007958 | |||||||||
| WBCnstr00007959 | |||||||||
| WBCnstr00013681 | |||||||||
| WBCnstr00030434 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (179) | |||||||||
| Map_info | Map | III | Position | 21.3196 | Error | 0.002695 | |||
| Positive | Positive_clone | T12D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026715 | ||||||||
| WBPaper00027281 | |||||||||
| WBPaper00031586 | |||||||||
| WBPaper00032932 | |||||||||
| WBPaper00036246 | |||||||||
| WBPaper00037449 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062599 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
