Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00018472

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00018472SMapS_parentSequenceF45E4
IdentityVersion2
NameCGC_namenep-16Person_evidenceWBPerson260
Sequence_nameF45E4.7
Molecular_nameF45E4.7a
F45E4.7a.1
CE37644
F45E4.7b
CE33648
F45E4.7c
CE37645
F45E4.7b.1
F45E4.7c.1
Other_nameCELE_F45E4.7Accession_evidenceNDBBX284604
Public_namenep-16
DB_infoDatabaseAceViewgene4I400
WormQTLgeneWBGene00018472
WormFluxgeneWBGene00018472
NDBlocus_tagCELE_F45E4.7
PanthergeneCAEEL|WormBase=WBGene00018472|UniProtKB=H2KYL1
familyPTHR11733
NCBIgene177541
RefSeqproteinNM_001028032.7
NM_001028034.5
NM_001383127.2
TrEMBLUniProtAccH2KYL1
Q86MG1
H2KYL2
UniProt_GCRPUniProtAccH2KYL1
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
210 Feb 2012 15:49:10WBPerson2970Name_changeCGC_namenep-16
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnep
Allele (71)
StrainWBStrain00032231
RNASeq_FPKM (74)
GO_annotation00021718
00021719
00021720
00123589
00123590
00123591
Ortholog (46)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity. Predicted to be involved in protein processing. Predicted to be located in plasma membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF45E4.7a
F45E4.7b
F45E4.7c
Corresponding_CDS_historyF45E4.7:wp97
F45E4.7a:wp105
F45E4.7a:wp150
F45E4.7c:wp150
Corresponding_transcriptF45E4.7a.1
F45E4.7b.1
F45E4.7c.1
Other_sequenceHBC15480_1
ES410644.1
Associated_featureWBsf651934
WBsf651935
WBsf651936
WBsf997024
WBsf997025
WBsf1017745
WBsf1017746
WBsf230303
WBsf230304
Experimental_infoRNAi_resultWBRNAi00047412Inferred_automaticallyRNAi_primary
WBRNAi00047411Inferred_automaticallyRNAi_primary
WBRNAi00032307Inferred_automaticallyRNAi_primary
WBRNAi00073094Inferred_automaticallyRNAi_primary
Expr_patternExpr1025367
Expr1037960
Expr1151254
Expr2013961
Expr2032200
Drives_constructWBCnstr00026492
Construct_productWBCnstr00026492
Microarray_results (32)
Expression_clusterWBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00040420:ALM_PLM_enriched
WBPaper00041954:ethanol_upregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00045420:fertilization_upregulated_transcript
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00050015:ifg-1(RNAi)_downregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053771:down_by_skn-1(RNAi)_at_24h-NaCl
WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055013:spt-16(RNAi)_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055941:nuo-6(qm200)_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056284:ints-1(RNAi)_downregulated
WBPaper00056330:glycine_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:K_Kprime
WBPaper00061340:mc2
WBPaper00061340:mc3
WBPaper00061340:NSM_parent
WBPaper00061340:Parent_of_K_Kprime
WBPaper00061340:Pharyngeal_intestinal_valve
WBPaper00061340:Pharyngeal_marginal_cell
WBPaper00061340:Pharyngeal_neuron
WBPaper00061340:pm3_pm4_pm5
WBPaper00061340:pm6
WBPaper00061340:pm7
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:nep-16-C08G9.2
WBPaper00061651:PLN_enriched
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00061952:daf-18(nr2037)_upregulated
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065560:E.coli-HB101_downregulated_F3
WBPaper00065560:E.coli-HB101_downregulated_P0
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065841:28_0
WBPaper00065841:29_0
WBPaper00065841:39_0
WBPaper00065841:39_1
WBPaper00065841:51_0
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_16
cgc4489_group_19
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025099:MA_specific
WBPaper00026980:intestine_enriched
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00032062:age_regulated_genes
WBPaper00034739:N2lessDR1350
WBPaper00034739:RIL17lessRIL14
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_H
WBPaper00038172:crh-1null_down_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00044091:Bpseudomallei_induced_8h
WBPaper00044091:Bpseudomallei_induced_12h
WBPaper00045673:colistin_upregulated
WBPaper00046548:dafachronic-acid_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00055899:nitroguanidine_regulated
[cgc5376]:let-60(G12V)-regulated_genes
[cgc6390]:Cluster_D
[cgc6390]:male_sex-enriched
Interaction (19)
Map_info (3)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene