WormBase Tree Display for Gene: WBGene00016442

WBGene00016442 SMap: S_parent: Sequence: C35D10
  Identity: Version: 1
    Name: Sequence_name: C35D10.5
      Molecular_name: C35D10.5
        C35D10.5.1
        CE46494
      Other_name: CELE_C35D10.5 Accession_evidence: NDB BX284603
      Public_name: C35D10.5
    DB_info: Database: AceView gene 3F951
        WormQTL gene WBGene00016442
        WormFlux gene WBGene00016442
        NDB locus_tag CELE_C35D10.5
        Panther gene CAEEL|WormBase=WBGene00016442|UniProtKB=Q18485
          family PTHR12184
        NCBI gene 183238
        RefSeq protein NM_065612.3
        TREEFAM TREEFAM_ID TF313220
        TrEMBL UniProtAcc Q18485
        UniProt_GCRP UniProtAcc Q18485
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01644352
      WBVar02156404
      WBVar00052401
      WBVar00824308
      WBVar00824309
      WBVar00824310
      WBVar00824311
      WBVar00824312
      WBVar00396806
      WBVar00396807
    RNASeq_FPKM (74)
    GO_annotation: 00061361
      00061362
    Ortholog (30)
    Structured_description (2)
  Molecular_info: Corresponding_CDS: C35D10.5
    Corresponding_CDS_history: C35D10.5:wp226
    Corresponding_transcript: C35D10.5.1
    Other_sequence (19)
    Associated_feature: WBsf645129
      WBsf658873
      WBsf224815
  Experimental_info: RNAi_result: WBRNAi00029581 Inferred_automatically: RNAi_primary
      WBRNAi00008491 Inferred_automatically: RNAi_primary
      WBRNAi00002539 Inferred_automatically: RNAi_primary
      WBRNAi00067800 Inferred_automatically: RNAi_primary
      WBRNAi00024744 Inferred_automatically: RNAi_primary
      WBRNAi00041987 Inferred_automatically: RNAi_primary
      WBRNAi00067840 Inferred_automatically: RNAi_primary
      WBRNAi00067847 Inferred_automatically: RNAi_primary
      WBRNAi00111899 Inferred_automatically: RNAi_primary
      WBRNAi00067876 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012988
      Expr1037047
      Expr1145997
      Expr2001443
      Expr2019666
    Drives_construct: WBCnstr00028067
    Construct_product: WBCnstr00028067
    Microarray_results (23)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032097:CGH-1-associated-mRNA
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00038168:lin-15B(n744)_downregulated
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045774:clk-1_upregulated
      WBPaper00046509:htz-1(ok3099)_downregulated
      WBPaper00046509:lin-35(n745)_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050903:mir-35-41(nDf50)_25C_downregulated
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051404:alg-1(gk214)_upregulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054571:BPA_F3_germline_upregulated
      WBPaper00055354:Rapamycin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00058958:100mGy-irradiation-72h_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)
      WBPaper00060084:cco-1(RNAi)_upregulated_N2
      WBPaper00060278:atp-2(RNAi)_upregulated
      WBPaper00060909:atfs-1(et18)_upregulated
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061527:pbs-3_18439-rpn-5
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066085:sin-3(syb2172)_downregulated
      WBPaper00066085:sin-3(tm1276)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_2
      WBPaper00025032:cluster_8
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00032165:A_to_C_transit_decreased
      WBPaper00032165:differentially_expressed_with_age_medoid_5
      WBPaper00036130:mir-243_down_regulated
      WBPaper00036286:Pattern_H
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00038231:Cry5B_2-fold_downregulated
      WBPaper00041370:spg-7(RNAi)_upregulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045263:ProLongevity-mtROS_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
      [cgc6390]:mixed_oogenesis-somatic
    Interaction (25)
  Map_info: Positive: Positive_clone: C35D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -2.41568
  Reference: WBPaper00038491
    WBPaper00040399
    WBPaper00055090
  Method: Gene