WormBase Tree Display for Gene: WBGene00013720

WBGene00013720 SMap: S_parent: Sequence: Y106G6H
  Identity: Version: 1
    Name (4)
    DB_info: Database: AceView gene 1L29
        WormQTL gene WBGene00013720
        WormFlux gene WBGene00013720
        NDB locus_tag CELE_Y106G6H.8
        Panther gene CAEEL|WormBase=WBGene00013720|UniProtKB=Q9U2Z9
          family PTHR43461
        NCBI gene 190926
        RefSeq protein NM_001392933.1
        TREEFAM TREEFAM_ID TF300271
        TrEMBL UniProtAcc Q9U2Z9
        UniProt_GCRP UniProtAcc Q9U2Z9
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (15)
    Strain: WBStrain00031022
    RNASeq_FPKM (74)
    GO_annotation: 00099803
      00099804
      00099805
    Contained_in_operon: CEOP1608
    Ortholog (33)
    Paralog: WBGene00008548 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011128 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020765 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of human TMEM256 (transmembrane protein 256). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y106G6H.8
    Corresponding_CDS_history: Y106G6H.8:wp177
    Corresponding_transcript: Y106G6H.8.1
    Other_sequence (28)
    Associated_feature: WBsf985011
      WBsf218430
  Experimental_info: RNAi_result: WBRNAi00004517 Inferred_automatically: RNAi_primary
      WBRNAi00036535 Inferred_automatically: RNAi_primary
      WBRNAi00061912 Inferred_automatically: RNAi_primary
      WBRNAi00066092 Inferred_automatically: RNAi_primary
      WBRNAi00055283 Inferred_automatically: RNAi_primary
      WBRNAi00117024 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027129
      Expr1036141
      Expr1158817
      Expr2007003
      Expr2025225
    Drives_construct: WBCnstr00029541
    Construct_product: WBCnstr00029541
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032097:CGH-1-associated-mRNA
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_larva_enriched
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00040209:B.thuringiensis_downregulated_MY15
      WBPaper00040560:hpl-2_embryo_downregulated
      WBPaper00041071:spe-44_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
      WBPaper00045521:Gender_Neutral
      WBPaper00045729:gld-2(RNAi)_downregulated
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_3
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053615:SMO-1_target
      WBPaper00055354:Metformin_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin_upregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00061340:RIC
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061466:nath-10(icb102)_downregulated
      WBPaper00061527:hrdl-1_3731-lst-4_2238
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062590:Aging_upregulated_coelomocyte
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_protein
      WBPaper00064005:starvation_upregulated_N2_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065993:glp-1(e2141)_downregulated
      cgc4489_group_2
      WBPaper00025032:cluster_6
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:0hr_muscle_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036286:Pattern_F
      WBPaper00037611:RNP-8-associated
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040963:TA300_down
      WBPaper00040985:AIN-2_L4_intestine
      WBPaper00041002:HF_3d_0.2mM_Down
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00045263:0.1mM-paraquat_upregulated
      [cgc5767]:cluster_1
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
      [cgc6390]:mixed_oogenesis-somatic
    Interaction (27)
  Map_info: Positive: Positive_clone: Y106G6H Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 5.04465
  Reference: WBPaper00028984
    WBPaper00038491
    WBPaper00055090
  Method: Gene