WormBase Tree Display for Gene: WBGene00012355

WBGene00012355 SMap: S_parent: Sequence: W09C5
  Identity: Version: 2
    Name: Sequence_name: W09C5.9
      Molecular_name: W09C5.9
      Other_name: CELE_W09C5.9 Accession_evidence: NDB BX284601
      Public_name: W09C5.9
    DB_info: Database: AceView gene 1O251
        WormQTL gene WBGene00012355
        NDB locus_tag CELE_W09C5.9
        NCBI gene 189314
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 29 Oct 2010 09:14:07 WBPerson1983 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Allele (42)
    RNASeq_FPKM (74)
    Structured_description: Automated_description: Enriched in AVE; intestine; and ventral nerve cord based on tiling array and microarray studies. Is affected by several genes including daf-16; lin-4; and lin-14 based on microarray and RNA-seq studies. Is affected by adsorbable organic bromine compound based on microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history (2)
    Corresponding_pseudogene: W09C5.9
    Other_sequence: SR04364
    Associated_feature: WBsf643813
      WBsf657031
      WBsf657032
  Experimental_info: Expr_pattern: Expr1022295
    Microarray_results (11)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00035073:mitochondria_protein
      WBPaper00035269:cde-1_regulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_embryo_enriched
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_larva_enriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00044736:flat_dev_expression
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00053888:drh-3(rrr2)_upregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated
      WBPaper00057140:pptr-1(tm3103)_downregulated
      WBPaper00061527:sre-33-ZK1025.1_8337
      WBPaper00062325:etr-1(lq61)_upregulated
      cgc4489_group_20
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026952:class_A
      WBPaper00026980:intestine_enriched
      WBPaper00036130:mir-243_down_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00044091:Bpseudomallei_repressed_12h
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_upregulated
  Map_info: Positive: Positive_clone: W09C5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 21.6362
  Reference: WBPaper00038491
  Method: Gene