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WormBase Tree Display for Gene: WBGene00012219

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Name Class

WBGene00012219SMapS_parentSequenceW03C9
IdentityVersion1
NameSequence_nameW03C9.1
Molecular_nameW03C9.1
W03C9.1.1
CE41166
Other_nameCELE_W03C9.1Accession_evidenceNDBBX284602
Public_nameW03C9.1
DB_infoDatabase (8)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (23)
RNASeq_FPKM (74)
GO_annotation00077441
Ortholog (18)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW03C9.1
Corresponding_CDS_historyW03C9.1:wp91
W03C9.1:wp176
Corresponding_transcriptW03C9.1.1
Associated_featureWBsf981301
WBsf224015
Experimental_infoRNAi_resultWBRNAi00054662Inferred_automaticallyRNAi_primary
WBRNAi00022458Inferred_automaticallyRNAi_primary
WBRNAi00036219Inferred_automaticallyRNAi_primary
Expr_patternExpr1020624
Expr1158203
Expr2006717
Expr2024937
Microarray_results (18)
Expression_clusterWBPaper00031070:rrf-3_eri-1_upregulated
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044260:nicotinc-acid_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044616:alg-3-4_upregulated_gene
WBPaper00044736:rising_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00045774:clk-1_upregulated
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00048611:MnCl2_downregulated
WBPaper00049177:rpn-10(ok1865)_upregulated
WBPaper00049498:npr-1(ur89)_regulated_1
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050522:mafr-1(tm6082)_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053321:lin-15B(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053599:female_vs_male_downregulated
WBPaper00053599:mitosis_vs_meiosis_upregulated
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055565:AVK_enriched
WBPaper00055648:sperm_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056167:Cry5B_downregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_adult
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057140:pptr-1(tm3103)_downregulated
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets
WBPaper00057162:meg-3_meg-4_downregulated_sRNA
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059117:B.subtilis_upregulated
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00059895:wounding_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061527:Y40H4A.2-ZK1053.2
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064716:paraquat_downregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065749:Heat-Shock-With-Recovery_upregulated_N2
WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
WBPaper00065841:13_1
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066118:cyclobutrifluram_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00031832:slr-2_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00036286:Pattern_E
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00040963:TA300_up
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045673:colistin_downregulated
WBPaper00048989:N2_rapamycin_upregulated
[cgc6390]:spermatogenesis-enriched
InteractionWBInteraction000281380
WBInteraction000340288
WBInteraction000503268
WBInteraction000548542
Map_infoPositivePositive_cloneW03C9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII4.58544
ReferenceWBPaper00030887
MethodGene