WormBase Tree Display for Gene: WBGene00011860

WBGene00011860 SMap: S_parent: Sequence: T20D3
  Identity: Version: 2
    Name: CGC_name: pigc-1
      Sequence_name: T20D3.8
      Molecular_name: T20D3.8
        T20D3.8.1
        CE23990
      Other_name: CELE_T20D3.8 Accession_evidence: NDB BX284604
      Public_name: pigc-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 11 Dec 2018 16:50:34 WBPerson1983 Name_change: CGC_name: pigc-1
    Status: Live
  Gene_info (8)
  Disease_info: Potential_model: DOID:0081223 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:8960)
  Molecular_info: Corresponding_CDS: T20D3.8
    Corresponding_transcript: T20D3.8.1
    Other_sequence: Tcol_isotig05559
      JI471222.1
      Dviv_isotig13886
      Tcol_isotig05560
      Dviv_isotig13884
      JI483361.1
      Tcol_isotig05561
      PPC07344_1
      CBC00226_1
      Tcol_isotig05562
    Associated_feature: WBsf652056
      WBsf230560
  Experimental_info: RNAi_result: WBRNAi00018905 Inferred_automatically: RNAi_primary
      WBRNAi00035704 Inferred_automatically: RNAi_primary
      WBRNAi00053617 Inferred_automatically: RNAi_primary
      WBRNAi00061888 Inferred_automatically: RNAi_primary
      WBRNAi00090859 Inferred_automatically: RNAi_primary
      WBRNAi00111231 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9505
      Expr1023420
      Expr1035226
      Expr1157175
      Expr2006288
      Expr2024505
    Drives_construct: WBCnstr00030328
    Construct_product: WBCnstr00014070
      WBCnstr00030328
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032097:CGH-1-associated-mRNA
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00048423:LP133_LF21_upregulated
      WBPaper00048988:daf-16(mu86)_upregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00051311:VGLN-1-interacting
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053657:N2_M.humicola-infection_24hr
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rapamycin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055827:pfd-6(gk493446)_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00056826:SGP_biased
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00059763:neuron_expressed
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00061340:Coelomocyte
      WBPaper00061340:hmc_and_homolog
      WBPaper00061340:Neuroblast_ALM_BDU
      WBPaper00061466:nath-10(icb99)_downregulated
      WBPaper00061527:F43G9.13-F33D11.12
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065841:22_0
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_2
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_F
      WBPaper00037611:RNP-8-associated
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00040963:TA300_down
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      [cgc5767]:cluster_6
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(41_min)
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
      [cgc6390]:Cluster_E
      [cgc6390]:intrinsic
    Interaction (27)
  Map_info: Map: IV Position: 4.18829
    Positive: Positive_clone: T20D3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038444
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene