WormBase Tree Display for Gene: WBGene00011145

WBGene00011145 SMap: S_parent: Sequence: R08D7
  Identity: Version: 1
    Name: Sequence_name: R08D7.5
      Molecular_name: R08D7.5
        R08D7.5.1
        CE51740
      Other_name: CELE_R08D7.5 Accession_evidence: NDB BX284603
      Public_name: R08D7.5
    DB_info: Database: AceView gene 3K65
        WormQTL gene WBGene00011145
        WormFlux gene WBGene00011145
        NDB locus_tag CELE_R08D7.5
        Panther gene CAEEL|WormBase=WBGene00011145|UniProtKB=P30644
          family PTHR23050
        NCBI gene 187699
        RefSeq protein NM_066585.4
        SwissProt UniProtAcc P30644
        TREEFAM TREEFAM_ID TF101141
        UniProt_GCRP UniProtAcc P30644
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (18)
    RNASeq_FPKM (74)
    GO_annotation: 00040867
      00040868
      00040869
      00040870
      00040871
      00118427
    Contained_in_operon: CEOP3560
    Ortholog (33)
    Paralog (14)
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Predicted to be involved in centriole replication and mitotic cell cycle. Predicted to be located in centriole and centrosome. Is an ortholog of human CETN2 (centrin 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R08D7.5
    Corresponding_CDS_history: R08D7.5:wp94
      R08D7.5:wp254
    Corresponding_transcript: R08D7.5.1
    Other_sequence: CR07119
      Tcir_isotig19422
      CR06507
      Tcir_isotig22403
      CBC16009_1
      CRC04685_1
    Associated_feature: WBsf225503
      WBsf225504
  Experimental_info: RNAi_result (6)
    Expr_pattern: Expr37
      Expr1020303
      Expr1034902
      Expr1155223
      Expr2005492
      Expr2023712
    Drives_construct: WBCnstr00030895
    Construct_product: WBCnstr00030895
    Microarray_results (20)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032031:DConiospora_upregulated_OligoArray_24h
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:A-class-motor-neurons_larva_enriched
      WBPaper00037950:all-neurons_embryo_enriched
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:AVA-neuron_embryo_enriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_embryo_enriched
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_larva_enriched
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045316:prg-1_downregulated_L2
      WBPaper00045521:Gender_Neutral
      WBPaper00048611:MnCl2_downregulated
      WBPaper00048988:daf-16(mu86)_upregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00054571:BPA_F3_germline_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055648:germline_expressed
      WBPaper00059763:neuron_expressed
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061340:AIA
      WBPaper00061340:AIY
      WBPaper00061340:ALA
      WBPaper00061340:AVB
      WBPaper00061340:AVG
      WBPaper00061340:AVK
      WBPaper00061340:DVA
      WBPaper00061340:I5
      WBPaper00061340:PVT
      WBPaper00061340:RID
      WBPaper00061340:RIS
      WBPaper00061340:URX
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061527:F54E7.8-orc-5_6376
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00065373:sek-1(km4)_upregulated_Ref
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4386_cluster_6_4
      cgc4489_group_2
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00035084:L4_enriched_AIN-2_IP
      WBPaper00035479:daf-16(RNAi)_upregulated
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_B
      WBPaper00037147:heatshock_upregulated
      WBPaper00037695:LD_3-day
      WBPaper00038427:lin-54_embryo_changed
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00041002:HQ_3d_0.2mM_Up
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-exposed_48h
      [cgc5767]:cluster_20
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
    SAGE_tag: SAGE:aagaagactt Strand: Sense
        Unambiguously_mapped
      SAGE:atttcaaaaa Strand: Antisense
      SAGE:atctctaattataatcc Strand: Sense
        Unambiguously_mapped
      SAGE:gacgttgacgaactgtg Strand: Sense
        Unambiguously_mapped
      SAGE:atctctaatt Strand: Sense
        Unambiguously_mapped
      SAGE:gtgatatgag Strand: Antisense
      SAGE:taatccttct Strand: Antisense
      SAGE:atttcaaaaaactgttg Strand: Antisense
      SAGE:gagagaagga Strand: Sense
        Unambiguously_mapped
      SAGE:gacgttgacg Strand: Sense
        Unambiguously_mapped
    Interaction (14)
  Map_info: Positive: Positive_clone: R08D7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III 0.0556967
  Reference: WBPaper00055090
  Method: Gene