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WormBase Tree Display for Gene: WBGene00010113

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Name Class

WBGene00010113SMapS_parentSequenceCHROMOSOME_I
IdentityVersion1
NameSequence_nameF55D12.5
Molecular_nameF55D12.5a
F55D12.5a.1
CE36387
F55D12.5b
CE46170
F55D12.5b.1
Other_nameCELE_F55D12.5Accession_evidenceNDBBX284601
Public_nameF55D12.5
DB_infoDatabaseAceViewgene1I484
WormQTLgeneWBGene00010113
WormFluxgeneWBGene00010113
NDBlocus_tagCELE_F55D12.5
NCBIgene3565799
RefSeqproteinNM_001383413.2
NM_001263700.3
TREEFAMTREEFAM_IDTF344235
TrEMBLUniProtAccG5EBM3
G5EFL3
UniProt_GCRPUniProtAccG5EFL3
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (95)
StrainWBStrain00032625
RNASeq_FPKM (74)
GO_annotation00009875
00009876
Contained_in_operon (2)
Ortholog (17)
Structured_descriptionAutomated_descriptionPredicted to enable kinase activity. Predicted to be involved in phosphorylation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF55D12.5a
F55D12.5b
Corresponding_CDS_historyF55D12.5:wp56
F55D12.5:wp119
Corresponding_transcriptF55D12.5a.1
F55D12.5b.1
Other_sequenceSS01145
Oden_isotig22948
TDC00893_1
CB038447.1
Dviv_isotig26946
Associated_featureWBsf664491
WBsf664492
WBsf664493
WBsf664494
WBsf984311
WBsf1010167
WBsf219835
Experimental_infoRNAi_resultWBRNAi00015729Inferred_automaticallyRNAi_primary
WBRNAi00007432Inferred_automaticallyRNAi_primary
WBRNAi00032880Inferred_automaticallyRNAi_primary
WBRNAi00048502Inferred_automaticallyRNAi_primary
WBRNAi00000772Inferred_automaticallyRNAi_primary
Expr_patternExpr1028341
Expr1034421
Expr1152292
Expr2004226
Expr2022448
Drives_constructWBCnstr00031659
Construct_productWBCnstr00031659
Microarray_results (21)
Expression_clusterWBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00048611:MnCl2_downregulated
WBPaper00048690:hermaphrodite-Z1-Z4_enriched
WBPaper00048690:male-Z1-Z4_enriched
WBPaper00048988:daf-16(mu86)_downregulated_neuron
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:germline_enriched
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_upregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_downregulated
WBPaper00055354:Metformin_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056826:SGP_biased
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058942:henn-1(pk2295)_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061340:AVH
WBPaper00061340:g1A
WBPaper00061340:g1A_g1P
WBPaper00061340:I5
WBPaper00061340:MC
WBPaper00061340:mc3
WBPaper00061340:Pharyngeal_neuron
WBPaper00061340:pm1_pm2
WBPaper00061340:pm8
WBPaper00061340:PVT
WBPaper00061340:Rectal_gland
WBPaper00061340:Z1_Z4
WBPaper00061527:hrdl-1_3731-lst-4_2238
WBPaper00061651:Distal_tip_cell_enriched
WBPaper00061651:I4_enriched
WBPaper00061651:M2_enriched
WBPaper00061651:MC_enriched
WBPaper00061651:NSM_enriched
WBPaper00061651:SIA_enriched
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064716:paraquat_upregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065841:9_0
WBPaper00065841:11_2
WBPaper00065841:11_3
WBPaper00065841:18_0
WBPaper00065841:24_0
WBPaper00065841:26_1
WBPaper00065841:26_2
WBPaper00065841:31_0
WBPaper00065841:46_0
WBPaper00065841:56_0
WBPaper00065841:58_1
WBPaper00065841:67_0
WBPaper00065841:95_0
WBPaper00065841:96_0
WBPaper00065841:105_0
WBPaper00065841:116_0
WBPaper00065841:124_0
WBPaper00065841:125_0
WBPaper00065841:126_0
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
WBPaper00025141:N2_Expressed_Genes
WBPaper00026980:intestine_enriched
WBPaper00027111:rrf-2(ok210)_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035905:FBF-1_Associated
WBPaper00037147:heatshock_upregulated
WBPaper00037611:RNP-8-associated
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00040821:Au-NP_regulated
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042234:xpa-1_upregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00055435:AuNPs_downregulated
WBPaper00056330:mrps-5(RNAi)_downregulated
InteractionWBInteraction000241560
Map_infoPositivePositive_cloneF55D12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI2.39323
MethodGene