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WormBase Tree Display for Gene: WBGene00009525

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Name Class

WBGene00009525SMapS_parentSequenceF38A1
IdentityVersion1
Name (4)
DB_infoDatabaseAceViewgene4C15
WormQTLgeneWBGene00009525
WormFluxgeneWBGene00009525
NDBlocus_tagCELE_F38A1.13
PanthergeneCAEEL|WormBase=WBGene00009525|UniProtKB=A4F317
familyPTHR23062
NCBIgene185442
RefSeqproteinNM_171262.1
TrEMBLUniProtAccA4F317
UniProt_GCRPUniProtAccA4F317
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (33)
RNASeq_FPKM (74)
Ortholog (14)
Paralog (39)
Structured_descriptionAutomated_descriptionEnriched in MC neuron; MCL; MCR; and intestine based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-2; clk-1; and lin-15B based on microarray; tiling array; and RNA-seq studies. Is affected by resveratrol based on microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF38A1.13
Corresponding_transcriptF38A1.13.1
Experimental_infoRNAi_resultWBRNAi00025431Inferred_automaticallyRNAi_primary
WBRNAi00014514Inferred_automaticallyRNAi_primary
WBRNAi00025432Inferred_automaticallyRNAi_primary
WBRNAi00046658Inferred_automaticallyRNAi_primary
WBRNAi00027325Inferred_automaticallyRNAi_primary
Expr_patternExpr1012338
Expr1150530
Expr2003452
Expr2021667
Microarray_results (14)
Expression_clusterWBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038438:E.faecalis_24hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045774:clk-1_downregulated
WBPaper00050015:ifg-1(RNAi)_upregulated
WBPaper00053888:drh-3(rrr2)_downregulated
WBPaper00055226:adr-1(tm668)_downregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00061340:MC
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026980:intestine_enriched
WBPaper00030985:Enterococcus_faecalis_upregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
SAGE_tagSAGE:attgatacttStrandAntisense
InteractionWBInteraction000209646
WBInteraction000281040
WBInteraction000299422
WBInteraction000299622
WBInteraction000334574
WBInteraction000406750
WBInteraction000412701
WBInteraction000440809
WBInteraction000462218
Map_infoPositivePositive_cloneF38A1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV-20.5548
MethodGene