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WormBase Tree Display for Gene: WBGene00009093

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Name Class

WBGene00009093SMapS_parentSequenceF23H12
IdentityVersion1
NameSequence_nameF23H12.3
Molecular_nameF23H12.3a
F23H12.3a.1
CE31912
F23H12.3b
CE05706
F23H12.3a.2
F23H12.3b.1
Other_nameCELE_F23H12.3Accession_evidenceNDBBX284605
Public_nameF23H12.3
DB_infoDatabase (8)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (72)
RNASeq_FPKM (74)
GO_annotation00005340
Ortholog (26)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF23H12.3a
F23H12.3b
Corresponding_CDS_historyF23H12.3:wp87
Corresponding_transcriptF23H12.3a.1
F23H12.3a.2
F23H12.3b.1
Other_sequence (24)
Associated_featureWBsf647361
WBsf647362
WBsf661883
WBsf661884
WBsf661885
WBsf661886
WBsf982012
WBsf1020562
WBsf232635
WBsf232636
Experimental_infoRNAi_resultWBRNAi00091335Inferred_automaticallyRNAi_primary
WBRNAi00065642Inferred_automaticallyRNAi_primary
WBRNAi00031339Inferred_automaticallyRNAi_primary
WBRNAi00045449Inferred_automaticallyRNAi_primary
WBRNAi00013837Inferred_automaticallyRNAi_primary
WBRNAi00013836Inferred_automaticallyRNAi_primary
WBRNAi00045451Inferred_automaticallyRNAi_primary
Expr_patternExpr1021066
Expr1033962
Expr1149370
Expr2002936
Expr2021153
Drives_constructWBCnstr00032469
Construct_productWBCnstr00032469
Microarray_results (24)
Expression_clusterWBPaper00031040:Cluster_5
WBPaper00037682:sma-2_downregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:BAG-neuron_embryo_enriched
WBPaper00037950:BAG-neuron_embryo_SelectivelyEnriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:intestine_larva_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_embryo_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044030:nhr-8(hd117)_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045571:germline-ablation_upregulated
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046509:lin-35(n745)_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_5
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055648:spermatheca_expressed
WBPaper00056167:Cry5B_downregulated
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060661:sensory-neuron_depleted
WBPaper00061340:g1P
WBPaper00061340:Pharyngeal_intestinal_valve
WBPaper00061340:pm8
WBPaper00061340:Rectal_gland
WBPaper00061341:28C_24h_upregulated
WBPaper00061527:C32F10.4-D1086.2
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061651:Rectal_gland_enriched
WBPaper00061651:Spermatheca_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064871:PA14_upregulated_AWA
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065029:cadmium_upregulated
WBPaper00065841:9_0
WBPaper00065841:9_1
WBPaper00065841:9_2
WBPaper00065841:24_0
WBPaper00065841:24_1
WBPaper00065841:27_0
WBPaper00065841:41_0
WBPaper00065841:41_1
WBPaper00065841:41_2
WBPaper00065841:43_0
WBPaper00065841:58_0
WBPaper00065841:58_1
WBPaper00065841:59_0
WBPaper00065841:68_0
WBPaper00065841:68_1
WBPaper00065841:78_0
WBPaper00065841:96_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
cgc4386_cluster_4_3
cgc4489_group_12
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026980:intestine_enriched
WBPaper00028789:PA14_vs_OP50_upregulated_4hr
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00030985:Serratia_marcesens_upregulated
WBPaper00034757:up_by_oxidative_stress
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00036123:Atrazine_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036286:Pattern_D
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00038427:lin-54_germline_changed
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040963:TA100_up
WBPaper00040963:TA300_up
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
InteractionWBInteraction000314634
Map_infoPositivePositive_cloneF23H12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV4.00634
ReferenceWBPaper00030887
MethodGene