WormBase Tree Display for Gene: WBGene00008863

WBGene00008863 SMap: S_parent: Sequence: F15D4
  Identity: Version: 1
    Name: Sequence_name: F15D4.6
      Molecular_name: F15D4.6
        F15D4.6.1
        CE36132
      Other_name: CELE_F15D4.6 Accession_evidence: NDB BX284602
      Public_name: F15D4.6
    DB_info: Database: AceView gene 2N539
        WormQTL gene WBGene00008863
        WormFlux gene WBGene00008863
        NDB locus_tag CELE_F15D4.6
        NCBI gene 184531
        RefSeq protein NM_064406.5
        TrEMBL UniProtAcc Q93514
        UniProt_GCRP UniProtAcc Q93514
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (36)
    RNASeq_FPKM (74)
    Ortholog: chrII_pilon.g6343 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in coelomocyte; germ line; germline precursor cell; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including Alovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F15D4.6
    Corresponding_CDS_history: F15D4.6:wp114
    Corresponding_transcript: F15D4.6.1
  Experimental_info: RNAi_result: WBRNAi00044720 Inferred_automatically: RNAi_primary
      WBRNAi00031005 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021792
      Expr1148693
      Expr2002624
      Expr2020841
    Microarray_results (20)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_embryo_enriched
      WBPaper00037950:AVA-neuron_embryo_SelectivelyEnriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:coelomocytes_larva_enriched
      WBPaper00037950:coelomocytes_larva_SelectivelyEnriched
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00040560:hpl-2_embryo_upregulated
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00041071:spe-44_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045521:Spermatogenic
      WBPaper00045774:clk-1_upregulated
      WBPaper00045809:rsd-2(yp10)_downregulated
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
      WBPaper00049098:hrde-1(tm1200)-induced_15C
      WBPaper00049098:hrde-1(tm1200)-induced_23C
      WBPaper00049098:hrde-1(tm1200)-induced_p15C
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
      WBPaper00050121:mir-60(n4947)_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050163:chd-3(eh4)_upregulated_100-cell-embryo
      WBPaper00050163:let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
      WBPaper00051265:F1_hrde-1(tm1200)_upregulated
      WBPaper00052885:hrde-1(tm1200)-emb-4(qm31)_regulated
      WBPaper00053154:human-amyloid-beta_tau_regulated
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00053302:alovudine_72h_regulated
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053599:oocyte_vs_mitosis_upregulated
      WBPaper00053782:daf-2(RNAi)_oocyte_upregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055648:sperm_expressed
      WBPaper00055827:daf-2(e1370)_upregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056443:DietaryRestriction_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
      WBPaper00057288:Cold_upregulated_transcript
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00059605:simr-1(cmp36)_downregulated
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00059739:hira-1(gk835598)_upregulated_adult
      WBPaper00059739:hira-1(gk835598)_upregulated_L1
      WBPaper00059739:hira-1(gk835598)_upregulated_L4
      WBPaper00059754:E.faecalis_OG1RF_upregulated
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060526:plp-1(ok2155)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060764:swsn-1(os22ts)_upregulated
      WBPaper00060886:met-2(n4256)_upregulated
      WBPaper00060909:atfs-1(et18)_upregulated
      WBPaper00060951:metr-1(os521)_downregulated
      WBPaper00060951:mrpl-2(osa3)_upregulated
      WBPaper00061340:AIN
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:hrde-1(tm1200)_upregulated
      WBPaper00061527:C10C5.2-Y58A7A.3
      WBPaper00061613:human-amyloid-beta_upregulated
      WBPaper00061995:mter-4(syb3662syb3403)_upregulated
      WBPaper00062056:met-2(n4256)_upregulated
      WBPaper00062146:MOG-7-degron_2h_regulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062497:xpf-1(tm2842)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064158:xpo-1(RNAi)_upregulated
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064315:mes-4(bn73)_upregulated_PGCs
      WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
      WBPaper00064473:ets-4(rrr16)_upregulated
      WBPaper00064509:static-magnetic-field_upregulated
      WBPaper00064721:fasn-1(g14)_upregulated_starved
      WBPaper00064769:him-17(me24)_downregulated
      WBPaper00065158:AFD_enriched
      WBPaper00065734:unc-25(e156)_upregulated
      WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
      WBPaper00065835:Day5_vs_Day1_downregulated
      WBPaper00065835:Day11_vs_Day1_upregulated
      WBPaper00065835:mtH2S-AP39-D0-treatment_downregulated_Day11
      WBPaper00065841:57_0
      WBPaper00065841:57_1
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00066110:Cisplatin_upregulated_diploid
      WBPaper00066163:crtc-1(wbm18)_downregulated_set-2(ok952)
      WBPaper00066163:set-2(ok952)_upregulated_N2
      cgc4489_group_10
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00027111:rde-3(ne298)_upregulated
      WBPaper00030839:Embryo_A_Class
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045294:50uM_DBAA_downregulated
      WBPaper00046083:oga-1(ok1207)_OP50_downregulated
      WBPaper00046083:ogt-1(ok1474)_OP50_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
    Interaction (23)
  Map_info: Positive: Positive_clone: F15D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 16.2576
  Method: Gene