WormBase Tree Display for Gene: WBGene00008856

WBGene00008856 SMap: S_parent: Sequence: F15D3
  Identity: Version: 1
    Name: Sequence_name: F15D3.6
      Molecular_name: F15D3.6
        F15D3.6.1
        CE15853
      Other_name: CELE_F15D3.6 Accession_evidence: NDB BX284601
      Public_name: F15D3.6
    DB_info: Database: AceView gene 1M164
        WormQTL gene WBGene00008856
        WormFlux gene WBGene00008856
        NDB locus_tag CELE_F15D3.6
        Panther gene CAEEL|WormBase=WBGene00008856|UniProtKB=O62173
          family PTHR11158
        NCBI gene 173040
        RefSeq protein NM_060551.6
        TREEFAM TREEFAM_ID TF312873
        TrEMBL UniProtAcc O62173
        UniProt_GCRP UniProtAcc O62173
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (130)
    RNASeq_FPKM (74)
    GO_annotation: 00037227
      00037228
      00037229
      00037230
      00116690
    Ortholog (39)
    Paralog: WBGene00007144 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable phosphatidic acid transfer activity. Predicted to be involved in phospholipid transport. Predicted to be located in mitochondrial intermembrane space. Is an ortholog of human PRELID3B (PRELI domain containing 3B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (4)
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr1012005
      Expr1033859
      Expr1148684
      Expr2002619
      Expr2020836
    Microarray_results (19)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00038118:aak-2(gt33)_upregulated
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040285:H2S_12hr_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_8
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050712:RC301_vs_DA650_4h-PA_upregulated
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_upregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Rapamycin_upregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00057154:HeatShock_downregulated_mRNA
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00059253:stearic-acid_upregulated
      WBPaper00059253:sucrose_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00060100:SiNP_upregulated_mRNA
      WBPaper00061203:spr-1(ok2144)_downregulated
      WBPaper00061274:hypergravity_15xg_upregulated
      WBPaper00061527:T23B5.3_15993-C17D12.1
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062590:Aging_downregulated_hypodermis
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064107:lin-35(n745)_downregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      cgc4386_cluster_5_4
      cgc4489_group_10
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00037611:RNP-8-associated
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_prime
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
      WBPaper00050407:hsp-6(RNAi)_upregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_N2
    Interaction: WBInteraction000199447
      WBInteraction000236742
      WBInteraction000340980
      WBInteraction000341027
      WBInteraction000341028
      WBInteraction000537097
      WBInteraction000537191
      WBInteraction000537224
      WBInteraction000537257
      WBInteraction000575836
  Map_info: Positive: Positive_clone: F15D3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 9.23955
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00062849
    WBPaper00064339
  Method: Gene