WormBase Tree Display for Gene: WBGene00008600

WBGene00008600 SMap: S_parent: Sequence: F09A5
  Identity: Version: 1
    Name: Sequence_name: F09A5.3
      Molecular_name: F09A5.3a
        F09A5.3a.1
        CE44413
        F09A5.3b
        CE44394
        F09A5.3b.1
      Other_name: CELE_F09A5.3 Accession_evidence: NDB BX284606
      Public_name: F09A5.3
    DB_info: Database: AceView gene XN771
        WormQTL gene WBGene00008600
        WormFlux gene WBGene00008600
        NDB locus_tag CELE_F09A5.3
        NCBI gene 184220
        RefSeq protein NM_001270283.3
            NM_001270284.2
        TrEMBL UniProtAcc D2YW06
            D2YW07
        UniProt_GCRP UniProtAcc D2YW06
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (204)
    RNASeq_FPKM (74)
    Ortholog (18)
    Structured_description: Automated_description: Enriched in anterior hypodermis; arc ant V; excretory gland cell; intestine; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including let-60; daf-12; and pgl-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including allantoin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F09A5.3a
      F09A5.3b
    Corresponding_CDS_history: F09A5.3:wp210
    Corresponding_transcript: F09A5.3a.1
      F09A5.3b.1
    Other_sequence: CRC08346_1
    Associated_feature (25)
  Experimental_info: RNAi_result (2)
    Expr_pattern: Expr1024737
      Expr1148036
      Expr2002317
      Expr2020536
    Drives_construct: WBCnstr00032839
    Construct_product: WBCnstr00032839
    Microarray_results (20)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:intestine_enriched
      WBPaper00050990:intestine_expressed
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00057140:pptr-1(tm3103)_upregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059728:5ug_cholesterol_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061340:Excretory_gland
      WBPaper00061340:FLP
      WBPaper00061340:hyp1V_and_ant_arc_V
      WBPaper00061340:hyp1_hyp2
      WBPaper00061466:nath-10(icb102)_downregulated
      WBPaper00061527:ckr-1-T09B9.3
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      cgc4489_group_9
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00033101:spr-5_regulated
      WBPaper00036123:Cadmium_regulated
      WBPaper00036286:Pattern_G
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_upregulated
      [cgc5376]:let-60(G12V)-regulated_genes
    Interaction (30)
  Map_info: Positive: Positive_clone: F09A5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 10.2149
  Method: Gene