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WormBase Tree Display for Gene: WBGene00007348

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Name Class

WBGene00007348SMapS_parentSequenceC05G5
IdentityVersion1
NameSequence_nameC05G5.2
Molecular_nameC05G5.2a
C05G5.2a.1
CE05225
C05G5.2b
CE52603
C05G5.2b.1
Other_nameCELE_C05G5.2Accession_evidenceNDBBX284606
Public_nameC05G5.2
DB_infoDatabaseAceViewgeneXP367
WormQTLgeneWBGene00007348
WormFluxgeneWBGene00007348
NDBlocus_tagCELE_C05G5.2
NCBIgene181568
RefSeqproteinNM_001361825.3
NM_078047.6
TrEMBLUniProtAccQ17676
A0A2K5ATY5
UniProt_GCRPUniProtAccQ17676
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (61)
RNASeq_FPKM (74)
Ortholog (12)
Structured_descriptionAutomated_descriptionEnriched in several structures, including MSpaaaaa; MSpaaapa; g2; ganglia; and rectal epithelial cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including Zidovudine; paraquat; and resveratrol based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC05G5.2a
C05G5.2b
Corresponding_transcriptC05G5.2a.1
C05G5.2b.1
Associated_featureWBsf648753
WBsf1007994
WBsf1007995
WBsf1007996
WBsf236711
Experimental_infoRNAi_resultWBRNAi00076086Inferred_automaticallyRNAi_primary
WBRNAi00010243Inferred_automaticallyRNAi_primary
WBRNAi00039798Inferred_automaticallyRNAi_primary
Expr_patternExpr1026057
Expr1033164
Expr1143880
Expr2000488
Expr2018711
Drives_constructWBCnstr00033812
Construct_productWBCnstr00033812
Microarray_results (21)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032425:down_in_lin-35
WBPaper00032976:non_compensated_genes
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00045521:Oogenic
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_downregulated
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050344:ASER-neuron_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051558:aging_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056218:daf-16(mu86)_upregulated_Day7
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00057083:daf-2(e1370)rsks-1(ok1255)_post-transcriptional_downregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059421:daf-1(m40)_downregulated
WBPaper00059421:daf-3(mgDf90)_upregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059987:Wounding_upregulated
WBPaper00061007:HB101_downregulated
WBPaper00061274:microgravity_upregulated
WBPaper00061340:g2
WBPaper00061340:K_Kprime
WBPaper00061340:M4_parent
WBPaper00061340:Neuroblast_I6_M5
WBPaper00061340:PVR
WBPaper00061340:PVT
WBPaper00061341:28C_24h_upregulated
WBPaper00061527:F08G12.1_2283-cst-1_319
WBPaper00061902:CAMT-1_interacting
WBPaper00062056:lin-36(we31)_upregulated
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-3(bn199)_upregulated_PGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064716:paraquat_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00025032:cluster_116
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026980:intestine_enriched
WBPaper00036286:Pattern_F
WBPaper00037611:RNP-8-associated
WBPaper00040963:TA300_down
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00053827:pyoverdine_upregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(143_min)
[cgc5767]:expression_class_E_pi(83_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc5767]:expression_class_MET
[cgc6390]:mixed_oogenesis-somatic
InteractionWBInteraction000242738
WBInteraction000567154
WBInteraction000583966
Map_info (2)
MethodGene