WormBase Tree Display for Gene: WBGene00006825

WBGene00006825 SMap: S_parent: Sequence: F13C5
  Identity: Version: 2
    Name: CGC_name: unc-96 Paper_evidence: WBPaper00027703
          Person_evidence: WBPerson261
      Sequence_name: F13C5.6
      Molecular_name: F13C5.6a
        F13C5.6a.1
        CE27424
        F13C5.6b
        CE29760
        F13C5.6b.1
      Other_name: gei-10 Person_evidence: WBPerson1796
        CELE_F13C5.6 Accession_evidence: NDB BX284606
      Public_name: unc-96
    DB_info: Database: AceView gene XB230
        WormQTL gene WBGene00006825
        WormFlux gene WBGene00006825
        NDB locus_tag CELE_F13C5.6
        NCBI gene 180413
        RefSeq protein NM_171939.5
            NM_171612.8
        TREEFAM TREEFAM_ID TF316199
        TrEMBL UniProtAcc O76566
            H2KZR3
        UniProt_GCRP UniProtAcc H2KZR3
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:43 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 02 Feb 2007 10:15:15 WBPerson2970 Event: Acquires_merge: WBGene00001567
              Name_change: Other_name: gei-10
      Acquires_merge: WBGene00001567
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    Reference_allele: WBVar00248853
    Allele (153)
    Legacy_information: su151 : very slightly slow slightly Egl moves well; abnormal muscle birefringence and ultrastruture collections of thin filaments near ends of cells. ES1 ME3. NA1.
      [C.elegansII] su151 : very slightly slow, slightly Egl, moves well; abnormal muscle birefringence and ultrastructure, collections of thin filaments near ends of cells. ES1 ME3. NA1. [Zengel and Epstein 1980; HE]
    Strain (2)
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog (27)
    Structured_description (2)
  Molecular_info: Corresponding_CDS: F13C5.6a
      F13C5.6b
    Corresponding_transcript: F13C5.6a.1
      F13C5.6b.1
    Other_sequence (22)
    Associated_feature (12)
  Experimental_info: RNAi_result (15)
    Expr_pattern: Expr7859
      Expr7860
      Expr7861
      Expr1021808
      Expr1032889
      Expr1148443
      Expr2017922
      Expr2036058
    Drives_construct: WBCnstr00012957
      WBCnstr00034134
    Construct_product: WBCnstr00012957
      WBCnstr00034134
    Antibody: WBAntibody00001112
    Microarray_results (24)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00032425:up_in_zfp-1
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037047:insoluble_protein
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:lem-2(tm1582)_upregulated
      WBPaper00045314:S.aureus-induced_N2
      WBPaper00045521:Spermatogenic
      WBPaper00046121:mesoderm_unique
      WBPaper00046497:B.thuringiensis_upregulated_protein
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00047132:glp-1(ts)-25C_upregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00049920:Glucose-Diet_upregulated_N2
      WBPaper00050053:muscle_enriched_Day4
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051245:cytoplasm_specific
      WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:alovudine_72h_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056284:ints-1(RNAi)_downregulated
      WBPaper00056284:ints-11(RNAi)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056826:hmc_biased
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057006:DietaryRestriction_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:AFD
      WBPaper00061340:BWM_anterior
      WBPaper00061340:DVC_parent
      WBPaper00061340:mu_sph
      WBPaper00061340:PLM
      WBPaper00061340:PLM_ALN_grandparent
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:myo-3-Y71G12B.11_22540
      WBPaper00061527:rgs-2_11061-pde-1
      WBPaper00061818:ELKS-1_interacting
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:hsf-1(RNAi)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:etr-1(lq61)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064107:lin-35(n745)_downregulated
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
      WBPaper00064716:paraquat_downregulated
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065149:lin-52(n771)_downregulated
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065835:Day5_vs_Day1_downregulated
      WBPaper00065841:1_1
      WBPaper00065841:7_0
      WBPaper00065841:7_3
      WBPaper00065841:24_0
      WBPaper00065841:26_0
      WBPaper00065841:26_1
      WBPaper00065841:38_1
      WBPaper00065841:61_0
      WBPaper00065841:143_0
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066038:mip-1(how5)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      cgc4386_cluster_3_5
      cgc4489_group_16
      cgc4489_group_20
      WBPaper00005124:estrogen_10-5M_regulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00031003:0hr_muscle_enriched
      WBPaper00031003:24hr_muscle_enriched
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00035873:osm-8_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040963:Q100_down
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041174:environmental
      WBPaper00041174:environmental_prime
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00048989:N2_allantoin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5376]:let-60(G12V)-regulated_genes
    Interaction (31)
  Map_info: Map: X Position: -19.557 Error: 0.643684
    Positive: Positive_clone: F13C5 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 395
      Multi_point: 313
        4495
        5271
        5713
  Reference (22)
  Method: Gene