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WormBase Tree Display for Gene: WBGene00004310

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Name Class

WBGene00004310SMapS_parentSequenceC44C11
IdentityVersion1
NameCGC_nameras-1
Sequence_nameC44C11.1
Molecular_nameC44C11.1a
C44C11.1a.1
CE24846
C44C11.1b
Other_nameR-ras1Accession_evidenceEMBLU56933
ras1Accession_evidenceEMBLU56930
CELE_C44C11.1Accession_evidenceNDBBX284602
Public_nameras-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classras
Allele (209)
StrainWBStrain00035764
WBStrain00035779
WBStrain00035962
Component_of_genotypeWBGenotype00000028
WBGenotype00000029
RNASeq_FPKM (74)
GO_annotation (11)
Ortholog (37)
Paralog (14)
Structured_description (2)
Disease_infoExperimental_modelDOID:0080690
Potential_modelDOID:0112170Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17271)
Models_disease_assertedWBDOannot00000070
WBDOannot00000498
Molecular_infoCorresponding_CDSC44C11.1a
Corresponding_CDS_historyC44C11.1b:wp213
Corresponding_transcriptC44C11.1b
C44C11.1a.1
Other_sequence (29)
Associated_feature (17)
Experimental_infoRNAi_resultWBRNAi00107767Inferred_automaticallyRNAi_primary
WBRNAi00093194Inferred_automaticallyRNAi_primary
WBRNAi00027673Inferred_automaticallyRNAi_primary
WBRNAi00042456Inferred_automaticallyRNAi_primary
Expr_patternExpr1021680
Expr1032135
Expr1146448
Expr2015260
Expr2033494
Construct_productWBCnstr00022879
WBCnstr00022880
Microarray_results (27)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:coelomocytes_embryo_enriched
WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00044736:flat_dev_expression
WBPaper00045420:fertilization_upregulated_transcript
WBPaper00045521:Spermatogenic
WBPaper00045571:germline-ablation_upregulated
WBPaper00045974:NSM_enriched_totalRNA_tiling
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050344:AFD-neuron_enriched
WBPaper00050344:PLM-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:intestine_enriched
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059763:neuron_expressed
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Anterior_arcade_cell
WBPaper00061340:DD
WBPaper00061340:Glia
WBPaper00061340:GLR
WBPaper00061340:PLM_ALN_great_grandparent
WBPaper00061340:PVR
WBPaper00061340:rect_D
WBPaper00061527:ccg-1_12351-ZC410.5
WBPaper00061527:kin-29_2839-unc-9_3883
WBPaper00061651:I3_enriched
WBPaper00061651:M3_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064716:paraquat_downregulated
WBPaper00065841:5_0
WBPaper00065841:5_1
WBPaper00065841:125_0
WBPaper00065945:epidermis-rpoa-2(-)_upregulated_protein
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4489_group_18
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026980:intestine_enriched
WBPaper00029437:dcr-1_upregulated
WBPaper00029437:rde-4_upregulated
WBPaper00030985:Serratia_marcesens_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031832:slr-2_regulated
WBPaper00032948:StarveUp1
WBPaper00034739:N2moreDR1350
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035588:alg-1(-)_upregulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00040985:AIN-2_asynchronous_muscle
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
Interaction (276)
Map_infoMapIIPosition9.67089Error0.137485
PositivePositive_cloneC44C11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4624
4686
5028
Pseudo_map_position
ReferenceWBPaper00014284
WBPaper00014573
WBPaper00027296
WBPaper00031857
WBPaper00038491
WBPaper00040813
WBPaper00041771
WBPaper00042598
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene